LOC110525787 (LOC106585035)


Basic Information

Item Value
gene id LOC110525787
gene name LOC106585035
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32750665 ~ 32759951 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606215.2
GGGGTGGGGTTGCACTAATACCAAAAAAATAGAAAGCAAAACAATCAGGGAGTGAAGCTCAAAACTAGACACTCAAGTGAAAattaaaggagaagagaagaacacACAATCCTGAAAGATGGGAGAGATGGCAGATCCAATCCAGTTAAAAGATGAGGGAAACAAGCATTTCCAAGCCGGTGAGGTGGACAAGGCCATTGAGTGCTACACAAAAGCCACCAAGTTGTGCAAAGACAAAAAGGTGCTCGCTGTCATCTACAGGAACAGATCAGCCTGCTTCCTGAAAAAGGAAAGCTACACCAATGCAGCCTCTGATGCCTCCAAAGCCATTGACGTGGATGCAGCAGACGTCAAAGCCCTGTTCCGGCGGTGCCAGGCTCTGGAGAAGCTGGACAAGCTGGACATGGCCTTCAAAGACGTCCAGAGGTGTTCCACCATCGAGCCCAAAAACAAGACCTTCCTGGAGACCCTCAGGAGGCTGGGGGCGGAGATCCAAGCCAAGctgaAGACAACCTTCTCCACAGACTCACGGGTCCAGAACATGTTTGACATTCTGCTTGATGAGGAGATGGACAAGGACAAGAAGGAAAAGGCTGCTAACAACCTGGTGGTTCTGGCCAGAGAAGATGCTGGCGCAGAGAGAATCTTCCAGAACAACGGAGTGCCTCTGCTGCTGGATATGCTTGAGACCGGAAAAGTAGAGATGGTCCTGGCCGCTATCCGTACCTTCGCGGGAATGTGCACTGGACACAAAGCACGGACCATGGCCATTATCCACCTGGTGGGCATTGACAAGCTGTGCAGCATCATGGCTGTCGACAATGAGGACATCGCCTTGGCAACTTCCGACCTGTTCCAGTGCATCAACGACTCCCTCACCGGAGGAGACCGGAGGATTTATGGGAAGGAGGAAGCCCTGGTTTTGGATGCAAGCAAAGACTTGAAGAGCATCCTGATGGCCCTGCTGGAGATGGTTGCCAGTAAGAAGGTTTCAGGACACGGCAGAGACCAGGCCCTGAACCTGCTGTGCAGGAACGTGCCTCGCAAGGACAAGAAAGACCATGACCACTCCAAGAGCCTCTTCACCATCGACCATGGTCTGAAGAAAATCCTGAAGGTGTGTGGCCAGATACCTGACCTCCCAGACCAGCTGCCCATGACGGAGAACACTCAGCTCATCGCCAGCGTGTTGCTTGACAAGCTCTGGGACGACCTGCGCTGCGACCCCGAGAGAGACCACTACAGGGAAGTCTGTGACGAGTACATCAAAGGCAAGTTTGACCCCAACGACATGGACAGGAACATCCACGCCATCAACGCTCTGTCAGGCCTGCTGCAGGGGCCATTTGAGGTTGGCAACCAGCTGGTGGGTCGCCAGGGCATCATGGAGATGATGGTGGCGCTGTGCGGCTCTGAGCGTGAGGTGGACCAGATGGTCGCCGTGGAAGCGCTGATCCACTCCTCGACGAAGATGAGCCGCGCCTCCTTCATCATCACCAACGGCGTGTCGCTGCTCAAAGACATCTACAAGAAGACGAAGAACGAGAAGATCAAGATCCGTGCGCTGGTGGGTCTGTGTAAGCTGGGCTCAGCAGGTGGAGATGACTATAGTATGAGGCAGTTTGCTGAGGGCTCCACTGAGAAACTGGCCAAGCAGTGCAGGAAGTGGCTGTGTAACTCTGCCATGGACACGAAGACCAGGAAGTGGGCTATAGAAGGTCTGGCCTATCTGACCCAAGACGCTGATGTAAAGGATGACTTTGTTGAGGACGAGCCTGCCATGAAAGCCATGTTTGAACTGGCCAAGTCTAAAGATAAGACCATCCTATATGCTGTGGCCTGTACCCTGGTCAACTGCACCAACAGCTATGAGAAGAAAGAGATCATGCCTGAGCTGGTTCAGCTGGCCAAGTTCTCCAAGCAGCACGTCCCAGAGCAGCACCCCAAGGACAAGAAGGATTTCATCCAGAAGAGAGTGAAGAGGATGCTAAAGGCAGGGGTCATCTCAGCTCTCACTGTCATGGTGAAAGCTGACAACCTTCTCCTGACTGACCAGACCAAAGAGATGCTGGCAAGGGTGTTCCTTGCCTTGGCAGATGATGCCAAAGACCGTGGCATGATTTGCGCCCATGGAGGGGGCAAGGCTCTGATCCCATTGGCTCTGGAGGGATCAGCTATAGGGAAAATAAGGGCCTCCCACGCCCTGGCCAAGATCGCTGCTGTGTCCAACCCAGAGATTGCCTTCCCAGGAGAGAGGatcTATGAGGTGGTGCGTCCTCTGGTCAGCCTGTTGCACCCTGAGAGAGACGGGGTGCAGAACTACGAGGCACTTCTGAGTCTCACCAACTTGGCTGGTCTCAACGACAAACTGAGAGTGAAGATCCTGAAAGAGAAGGCTCTCCCTGAGATTGAGCAGTACATGTTTGAAGACCATGATCATATCAGACAGGCAGCCACAGAGTGCATGTGCAACCTGGTGACATGCAAAGAGGTGCAGGATCGGTACCTGGAGGATGGGAATGATAGGCTGAAGCTGCTGGTGCTGATGTGTGCTGAGGACGATGAAAAGCTCCAGAGAGCTGCAGCCGGAGCACTGGCCATGCTCACTGCCGCCCAGAAGAAACTGTGCACCAAGATGACCCTGGTGACTTTGCAGTGGATGGAGATCCTTCAGAGGCTCATTCTCCATGACCAGCCCCAGATCCAGCACAGAGGCCTGGTGATCGTGTACAACATACTGAACTCGGACGACAACGAGCTGGCCAAGAAGCTGATCGAGAGCGAGATCCTGGAGATCCTGACAGTGATTGGCAAAGCAATGGACAACCCCAAGAGGCAGCTTGTGATCGATGTGGCACGCACCTGCCTGGTCAAGGCCATGGACCTCGGCCTCATCAAGCCATTCACAACCCCTTCTTAAAGCAGTGTTTCTTAAGCTTTTTATAGTACTACGGACTGGCTTGCAATGGACCTACTCCCTTAAAGGCGCAACCCAATCAACCAGAAACAAATCACACAGAAATAAGAACATGTATGACAGTTCCATTTTAGTCCAATGAGTGTGTATATTTGGTGGGTACACTTGCAAACGCCCATACCCCTCACTGCCCACAGTCTTCCCAAAGTGTCAGGCCAACACTTGTTACAGTACATTGGACTTACAGTTTGTGCCTTTTAATGAAAACTGCAACGTGTGAGCTAATTACAGTCTGCCTAACTTGCTGATCAGATACACCCCACAGATTGAGGTCCAGAGACTGAAGATTGAGAAACTCTGTGTTGAGTGTGGGCCAATGGACAGGGAGGCCAGGAGATGGGACTGATGGTGCACCTGAACAGCCACCTATCATGAAATCAGAGACAGTACAAATGAATCTCTTGAGATATTTTATTTCGAATTTTCAGAAAGAAAACACCACGTGAACGTTTAACCATTTATTAGAAAAGATAACAATGCCTGTCTTGGCATTAGAGCTCTGTCCTGCAGGGTAGCTCACTGCCAGAGCCAAGCGTCATATGAATGTTATAATAAAACTATAGGCAGTGAGCACGATACGCTATATCAAATCCCCCCGATGGAAGAAACAGAACCCACAGGTGGAGGCTGGGCTGGTGGTGGGATATCAGAAACAGAACCCACAGGTGGAGGCTGGGCTGGTGGTGGGATATCAGAAACAGAACCCACAGGTGGAGGCTGGGCTGGTGGTGGGATATCAGAAACAGCAAGCATAGCGAGTAACAGCTAGTTACAGCAGCAAGAGACATCAGCGCATGAGAGCGTGTGACATCCAGCATTGGGGAAACATGTGCAGAACTAGTGGACTTCAATAGACCGCATGTAATTAATGGGAATCCAACTGGTGCAATATCCGCTGATGCGGTGTCAGCTGAAGCCACCACACTCATGTTTCCCTTCTGAACCGGCTACACTTTATATAGATTTTTTTGTAAGTTAAATAGAGTTTATTTGTGTGGATAAGAGGTCTTTGTTTAATGTTATTTGTATTTTACACTTAAGGATAAAGATGAGAATTTTGA
>XR_005052067.1
GGGGTGGGGTTGCACTAATACCAAAAAAATAGAAAGCAAAACAATCAGGGAGTGAAGCTCAAAACTAGACACTCAAGTGAAAattaaaggagaagagaagaacacACAATCCTGAAAGATGGGAGAGATGGCAGATCCAATCCAGTTAAAAGATGAGGGAAACAAGCATTTCCAAGCCGGTGAGGTGGACAAGGCCATTGAGTGCTACACAAAAGCCACCAAGTTGTGCAAAGACAAAAAGGTGCTCGCTGTCATCTACAGGAACAGATCAGCCTGCTTCCTGAAAAAGGAAAGCTACACCAATGCAGCCTCTGATGCCTCCAAAGCCATTGACGTGGATGCAGCAGACGTCAAAGCCCTGTTCCGGCGGTGCCAGGCTCTGGAGAAGCTGGACAAGCTGGACATGGCCTTCAAAGACGTCCAGAGGTGTTCCACCATCGAGCCCAAAAACAAGACCTTCCTGGAGACCCTCAGGAGGCTGGGGGCGGAGATCCAAGCCAAGctgaAGACAACCTTCTCCACAGACTCACGGGTCCAGAACATGTTTGACATTCTGCTTGATGAGGAGATGGACAAGGACAAGAAGGAAAAGGCTGCTAACAACCTGGTGGTTCTGGCCAGAGAAGATGCTGGCGCAGAGAGAATCTTCCAGAACAACGGAGTGCCTCTGCTGCTGGATATGCTTGAGACCGGAAAAGTAGAGATGGTCCTGGCCGCTATCCGTACCTTCGCGGGAATGTGCACTGGACACAAAGCACGGACCATGGCCATTATCCACCTGGTGGGCATTGACAAGCTGTGCAGCATCATGGCTGTCGACAATGAGGACATCGCCTTGGCAACTTCCGACCTGTTCCAGTGCATCAACGACTCCCTCACCGGAGGAGACCGGAGGATTTATGGGAAGGAGGAAGCCCTGGTTTTGGATGCAAGCAAAGACTTGAAGAGCATCCTGATGGCCCTGCTGGAGATGGTTGCCAGTAAGAAGGTTTCAGGACACGGCAGAGACCAGGCCCTGAACCTGCTGTGCAGGAACGTGCCTCGCAAGGACAAGAAAGACCATGACCACTCCAAGAGCCTCTTCACCATCGACCATGGTCTGAAGAAAATCCTGAAGGTGTGTGGCCAGATACCTGACCTCCCAGACCAGCTGCCCATGACGGAGAACACTCAGCTCATCGCCAGCGTGTTGCTTGACAAGCTCTGGGACGACCTGCGCTGCGACCCCGAGAGAGACCACTACAGGGAAGTCTGTGACGAGTACATCAAAGGCAAGTTTGACCCCAACGACATGGACAGGAACATCCACGCCATCAACGCTCTGTCAGGCCTGCTGCAGGGGCCATTTGAGGTTGGCAACCAGCTGGTGGGTCGCCAGGGCATCATGGAGATGATGGTGGCGCTGTGCGGCTCTGAGCGTGAGGTGGACCAGATGGTCGCCGTGGAAGCGCTGATCCACTCCTCGACGAAGATGAGCCGCGCCTCCTTCATCATCACCAACGGCGTGTCGCTGCTCAAAGACATCTACAAGAAGACGAAGAACGAGAAGATCAAGATCCGTGCGCTGGTGGGTCTGTGTAAGCTGGGCTCAGCAGGTGGAGATGACTATAGTATGAGGCAGTTTGCTGAGGGCTCCACTGAGAAACTGGCCAAGCAGTGCAGGAAGTGGCTGTGTAACTCTGCCATGGACACGAAGACCAGGAAGTGGGCTATAGAAGGTCTGGCCTATCTGACCCAAGACGCTGATGTAAAGGATGACTTTGTTGAGGACGAGCCTGCCATGAAAGCCATGTTTGAACTGGCCAAGTCTAAAGATAAGACCATCCTATATGCTGTGGCCTGTACCCTGGTCAACTGCACCAACAGCTATGAGAAGAAAGAGATCATGCCTGAGCTGGTTCAGCTGGCCAAGTTCTCCAAGCAGCACGTCCCAGAGCAGCACCCCAAGGACAAGAAGGATTTCATCCAGAAGAGAGTGAAGAGGATGCTAAAGGCAGGGGTCATCTCAGCTCTCACTGTCATGGTGAAAGCTGACAACCTTCTCCTGACTGACCAGACCAAAGAGATGCTGGCAAGGGTGTTCCTTGCCTTGGCAGATGATGCCAAAGACCGTGGCATGATTTGCGCCCATGGAGGGGGCAAGGCTCTGATCCCATTGGCTCTGGAGGGATCAGCTATAGGGAAAATAAGGGCCTCCCACGCCCTGGCCAAGATCGCTGCTGTGTCCAACCCAGAGATTGCCTTCCCAGGAGAGAGGatcTATGAGGTGGTGCGTCCTCTGGTCAGCCTGTTGCACCCTGAGAGAGACGGGGTGCAGAACTACGAGGCACTTCTGAGTCTCACCAACTTGGCTGGTCTCAACGACAAACTGAGAGTGAAGATCCTGAAAGAGAAGGCTCTCCCTGAGATTGAGCAGTACATGTTTGAAGACCATGATCATATCAGACAGGCAGCCACAGAGTGCATGTGCAACCTGGTGACATGCAAAGAGGTGCAGGATCGGTACCTGGAGGATGGGAATGATAGGCTGAAGCTGCTGGTGCTGATGTGTGCTGAGGACGATGAAAAGCTCCAGAGAGCTGCAGCCGGAGCACTGGCCATGCTCACTGCCGCCCAGAAGAAACTGTGCACCAAGATGACCCTGGTGACTTTGCAGTGGATGGAGATCCTTCAGAGGCTCATTCTCCATGACCAGCCCCAGATCCAGCACAGAGGCCTGGTGATCGTGTACAACATACTGAACTCGGACGACAACGAGCTGGCCAAGAAGCTGATCGAGAGCGAGATCCTGGAGATCCTGACAGTGATTGGCAAAGCAATGGACAACCCCAAGAGGCAGCTTGTGATCGATGTGGCACGCACCTGCCTGGTCAAGGCCATGGACCTCGGCCTCATCAAGCCATTCACAACCCCTTCTTAAAGCAGTGTTTCTTAAGCTTTTTATAGTACTACGGACTGGCTTGCAATGGACCTACTCCCTTAAAGGCGCAACCCAATCAACCAGAAACAAATCACACAGAAATAAGAACATGTATGACAGTTCCATTTTAGTCCAATGAGTGTGTATATTTGGTGGGTACACTTGCAAACGCCCATACCCCTCACTGCCCACAGTCTTCCCAAAGTGTCAGGCCAACACTTGTTACAGTACATTGGACTTACAGTTTGTGCCTTTTAATGAAAACTGCAACGTGTGAGCTAATTACAGTCTGCCTAACTTGCTGATCAGATACACCCCACAGATTGAGGTCCAGAGACTGAAGATTGAGAAACTCTGTGTTGAGTGTGGGCCAATGGACAGGGAGGCCAGGAGATGGGACTGATGGTGCACCTGAACAGCCACCTATCATGAAATCAGAGACAGTACAAATGAATCTCTTGAGATATTTTATTTCGAATTTTCAGAAAGAAAACACCACGTGAACGTTTAACCATTTATTAGAAAAGATAACAATGCCTGTCTTGGCATTAGAGCTCTGTCCTGCAGGGTAGCTCACTGCCAGAGCCAAGCGTCATATGAATGTTATAATAAAACTATAGGCAGTGAGCACGATACGCTATATCAAATCCCCCCGATGGAAGAAACAGAACCCACAGGTGGAGGCTGGGCTGGTGGTGGGATATCAGAAACAGAACCCACAGGTGGAGGCTGGGCTGGTGGTGGGATATCAGAAACAGCAAGCATAGCGAGTAACAGCTAGTTACAGCAGCAAGAGACATCAGCGCATGAGAGCGTGTGACATCCAGCATTGGGGAAACATGTGCAGAACTAGTGGACTTCAATAGACCGCATGTAATTAATGGGAATCCAACTGGTGCAATATCCGCTGATGCGGTGTCAGCTGAAGCCACCACACTCATGTTTCCCTTCTGAACCGGCTACACTTTATATAGATTTTTTTGTAAGTTAAATAGAGTTTATTTGTGTGGATAAGAGGTCTTTGTTTAATGTTATTTGTATTTTACACTTAAGGATAAAGATGAGAATTTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21991 UNC45; protein unc-45

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606215.2 False 4038 mRNA 0.51 20 32750665 32759951
XR_005052067.1 True 3993 mRNA 0.51 21 32750665 32759951

Neighbor

gene id symbol gene type direction distance location
LOC110525785 LOC106585030 coding downstream 19989 32690707 ~ 32730676 (-)
LOC110525784 LOC106585031 coding downstream 67766 32680037 ~ 32682899 (-)
LOC110526888 LOC106585027 coding downstream 229765 32508680 ~ 32520900 (-)
thbs4a LOC106585023 coding downstream 267715 32469312 ~ 32482950 (-)
setbp1 setbp1 coding downstream 372140 32320495 ~ 32378525 (-)
LOC110525788 LOC106585037 coding upstream 123974 32883925 ~ 32924410 (-)
LOC110525792 LOC106585039 coding upstream 187083 32947034 ~ 32962214 (-)
LOC110525797 LOC106585042 coding upstream 313750 33073701 ~ 33076106 (-)
LOC110525798 LOC106585045 coding upstream 339115 33099066 ~ 33103756 (-)
LOC110525800 ergi2 coding upstream 354745 33114696 ~ 33130672 (-)
G497573 LOC106585028 non-coding downstream 87412 32658242 ~ 32663253 (-)
G497518 NA non-coding downstream 138147 32588068 ~ 32612518 (-)
G497428 NA non-coding downstream 339484 32410937 ~ 32411181 (-)
G497427 NA non-coding downstream 339770 32410590 ~ 32410895 (-)
G497663 NA non-coding upstream 65906 32825857 ~ 32826944 (-)
G497698 NA non-coding upstream 167358 32927309 ~ 32927532 (-)
G497699 NA non-coding upstream 167642 32927593 ~ 32930771 (-)
G497704 NA non-coding upstream 177933 32937884 ~ 32938314 (-)
G497707 NA non-coding upstream 182263 32942214 ~ 32942494 (-)
G496851 NA other downstream 858016 31843463 ~ 31892649 (-)
G496777 NA other downstream 1078738 31670978 ~ 31671927 (-)
G496772 NA other downstream 1089047 31661393 ~ 31661618 (-)
G495560 NA other downstream 2175092 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 567556 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 572699 33332650 ~ 33336818 (-)
G498960 NA other upstream 1280408 34040359 ~ 34041174 (-)
G501142 NA other upstream 3005415 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3748105 36507843 ~ 36569143 (-)

Expression


Co-expression Network