G497663


Basic Information

Item Value
gene id G497663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32825857 ~ 32826944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU565409
ggttacagataccttaaaaaaaaggtaggtgAACTAGGCGTAAACTCCAAAGAGCAAGGTAACACATTCCCAGAAGAGAGGCATGTCTTGTAAAAGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATGTATTGTAAAAAGGTCAGTGTAAAATGTATTGTAAAAAGGTCAGTGTAAAATGTCTTGTAAAAAGGTCAGTGTAAAATCTTTGTAAAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATG
>TU565411
ggttacagataccttaaaaaaaaggtaggtgAACTAGGCGTAAACTCCAAAGAGCAAGGTAACACATTCCCAGAAGAGAGGCATGTCTTGTAAAAGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATGTATTGTAAAGGTCAGTGTAAAATGTCTTGTAAAGGTCAGTGTAAAATG

Function

NR:

description
PREDICTED: probable inactive protein kinase DDB_G0270444

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU565409 False 476 lncRNA 0.32 2 32825857 32826944
TU565411 True 301 lncRNA 0.34 3 32825857 32826944

Neighbor

gene id symbol gene type direction distance location
LOC110525787 LOC106585035 coding downstream 65906 32750665 ~ 32759951 (-)
LOC110525785 LOC106585030 coding downstream 95181 32690707 ~ 32730676 (-)
LOC110525784 LOC106585031 coding downstream 142958 32680037 ~ 32682899 (-)
LOC110526888 LOC106585027 coding downstream 304957 32508680 ~ 32520900 (-)
thbs4a LOC106585023 coding downstream 342907 32469312 ~ 32482950 (-)
LOC110525788 LOC106585037 coding upstream 56981 32883925 ~ 32924410 (-)
LOC110525792 LOC106585039 coding upstream 120090 32947034 ~ 32962214 (-)
LOC110525797 LOC106585042 coding upstream 246757 33073701 ~ 33076106 (-)
LOC110525798 LOC106585045 coding upstream 272122 33099066 ~ 33103756 (-)
LOC110525800 ergi2 coding upstream 287752 33114696 ~ 33130672 (-)
G497573 LOC106585028 non-coding downstream 162604 32658242 ~ 32663253 (-)
G497518 NA non-coding downstream 213339 32588068 ~ 32612518 (-)
G497428 NA non-coding downstream 414676 32410937 ~ 32411181 (-)
G497427 NA non-coding downstream 414962 32410590 ~ 32410895 (-)
G497698 NA non-coding upstream 100365 32927309 ~ 32927532 (-)
G497699 NA non-coding upstream 100649 32927593 ~ 32930771 (-)
G497704 NA non-coding upstream 110940 32937884 ~ 32938314 (-)
G497707 NA non-coding upstream 115270 32942214 ~ 32942494 (-)
G497708 NA non-coding upstream 117257 32944201 ~ 32944747 (-)
G496851 NA other downstream 933208 31843463 ~ 31892649 (-)
G496777 NA other downstream 1153930 31670978 ~ 31671927 (-)
G496772 NA other downstream 1164239 31661393 ~ 31661618 (-)
G495560 NA other downstream 2250284 30575118 ~ 30575573 (-)
G498484 rpl6 other upstream 500563 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 505706 33332650 ~ 33336818 (-)
G498960 NA other upstream 1213415 34040359 ~ 34041174 (-)
G501142 NA other upstream 2938422 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 3681112 36507843 ~ 36569143 (-)

Expression


Co-expression Network