si:ch211-127m7.2 (LOC106585066)


Basic Information

Item Value
gene id si:ch211-127m7.2
gene name LOC106585066
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 33724618 ~ 33730221 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606262.2
GCCCATTGATGACGGGTTGGCAACGCACACAAGGGGCCTTAATACGATACCAACGGAGTTTCCCATCTCCTTACAAGTATATCCTCCCTACGGCTGCGGACGTATCAAACCGGAAAAAAATATAAGTTGTGAAATGACATCGAAAATTCACGGAGTTATGATATAAACACGGTATTTTAGTCGTATTTCTGTACTACTTTAAACTGAGCATACAGTAACATGGCAGGAAAGCGGCGGGAACTACCGTCTTGGATGGCAAGGAAGGATGAGGACAGAGTGAAAGATAAGGAGACACTGAAGAGGATAACTTCAGGCAAGAGAACGAGGAAACGAGTTGAAAGAGTGGCCTTCTACTGCATGAATGAAAAGGAGCTGGTGGAGGCAGCTGTCAGTTATTTGAATGATTTTGGAGGTGGAGAAGATGGAGCTCGTCATGATGACAAACAGGTCAAAAGGAGTGTGGTGGGCTGCTCTATGAATGCAAAAAACAACTGTGtcagggagaagaagaggaggctgTCTGAGTTGGACGTGGTGGCGGAGTCCTCAGACTCTGATGCACAGGAGAGGACGTATGTCTCAGAAACGGACATCGATGTAGCCGAGGAGGACACTCTACTGTACGCTCAAAACAACAACACtcacaataacaacacagagCAGGGACCTGAGGGTCAGAGTTCAGGACCAGGTCACGACGATGATGATGGTTCAGGGGATTTGGCTCAGGATGTTGGAGCAGAGGACCACTCACGGTCACAGTCTCCCACAGCAGACGATGATGCCCTCAGGCTTGTAAGGGAGATATTCTTCACCTGATGATAAACCACAGAACACTTTGAGATGCTTTCCTTACAAACTGAGATGGGGGGGGATACACAGTGAGGTCATGTAGACTAGAGTATATTAAAAATAGTCAATGGGGGCAAATGGGATCCATAACATGAATTATTTATAGTGGGTTCTTGGTAATGTTAGTAAATACATCTCCATTGAAAGCATTTATGAATACAGGATTAGGTTTAATCTGTGAAGTGTTTATGCACCGTCTTAGAAAAGGCATTGGGCCTAAAAACTGTCTCACTAGGTGCCACTAATGATGTGAACAATATTAGGCGCAACTGCTCAAGATAGTTTCCCCTTTAAGAGCAGTAAAAGGGCAATGACATACTTTGTAATAGAAAccaaaaaatataattttgatCGAAGAATAAAATGTGACTACTGG

Function

NR:

description
uncharacterized protein LOC110525822

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606262.2 True 1228 mRNA 0.44 3 33724618 33730221

Neighbor

gene id symbol gene type direction distance location
LOC118965076 NA coding downstream 131523 33589856 ~ 33593095 (-)
LOC110526891 NA coding downstream 148071 33570005 ~ 33576547 (-)
LOC110525813 polb coding downstream 380533 33337003 ~ 33344085 (-)
LOC110525812 LOC103397138 coding downstream 387800 33332650 ~ 33336818 (-)
LOC110525810 NA coding downstream 402762 33320253 ~ 33321907 (-)
LOC110525826 NA coding upstream 43838 33774059 ~ 33778109 (-)
LOC110525825 rasf2 coding upstream 47988 33778209 ~ 33792523 (-)
LOC110525827 LOC106585070 coding upstream 70061 33800282 ~ 33877105 (-)
kcnip3a LOC106584951 coding upstream 152423 33882644 ~ 33927045 (-)
LOC110525832 LOC106585071 coding upstream 217741 33947962 ~ 33950833 (-)
G498649 NA non-coding downstream 159370 33548283 ~ 33565248 (-)
G498630 NA non-coding downstream 204694 33519704 ~ 33519924 (-)
G498625 NA non-coding downstream 209014 33515272 ~ 33515604 (-)
G498621 NA non-coding downstream 215830 33505279 ~ 33508788 (-)
G498546 NA non-coding downstream 323072 33401333 ~ 33401546 (-)
G498619 NA non-coding upstream 20385 33750606 ~ 33750988 (-)
G498787 NA non-coding upstream 23335 33753556 ~ 33753885 (-)
G498746 NA non-coding upstream 63550 33793771 ~ 33798807 (-)
G498833 NA non-coding upstream 221848 33952069 ~ 33952604 (-)
G498830 LOC106585073 non-coding upstream 240622 33970843 ~ 33973777 (-)
G498484 rpl6 other downstream 394114 33327507 ~ 33330504 (-)
LOC110525784 LOC106585031 other downstream 1041771 32680037 ~ 32682899 (-)
G496851 NA other downstream 1831969 31843463 ~ 31892649 (-)
G496777 NA other downstream 2052691 31670978 ~ 31671927 (-)
G498960 NA other upstream 310138 34040359 ~ 34041174 (-)
G501142 NA other upstream 2035145 35765366 ~ 35767929 (-)
hk2 LOC106585103 other upstream 2777835 36507843 ~ 36569143 (-)
vamp8 LOC106585118 other upstream 3320482 37050701 ~ 37065030 (-)
G503064 NA other upstream 3509623 37239844 ~ 37240937 (-)

Expression


Co-expression Network