G483875


Basic Information

Item Value
gene id G483875
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 19933244 ~ 19935726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU549918
CCTTATTTTATAAATTTACTGTAACCACGTAGATTGTTTGGGTCATTAACACACACCTcgcctgtgtgtctgtgcaccACGTGGAAGATGGTGTCATACTGTGGCTCCCAGGTCATGACCTTGTCGAAGCTCTTGCCCTGGATCCTGAACAGCATAAACTTGAGCAGGTCCAGCTTGATGGGCTGCTCTATGAACACCACATAGTTCTCTGACATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAACACAGGGATAAAGGTAGAGCTGAGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGTTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACATcacagggatagaggtagagctgaGGGTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGGTTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACACATcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACACAACACAGGGATAAAGGTAGAGCTGAAGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaAGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACATcacagggatagaggtagagctgaAGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACATcacagggatagaggtagagctgaGGGTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGTTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGAATATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGTTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTA
>TU549920
CCTTATTTTATAAATTTACTGTAACCACGTAGATTGTTTGGGTCATTAACACACACCTcgcctgtgtgtctgtgcaccACGTGGAAGATGGTGTCATACTGTGGCTCCCAGGTCATGACCTTGTCGAAGCTCTTGCCCTGGATCCTGAACAGCATAAACTTGAGCAGGTCCAGCTTGATGGGCTGCTCTATGAACACCACATAGTTCTCTGACATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAACACAGGGATAAAGgtagagctgaGGTTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACATcacagggatagaggtagagctgaGGTTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACACATcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTAATGGCTGCAGTCACACAACACAGGGATAAAGgtagagctgaGAATATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGTTATTATGGCTACAGTCACACAAcacagggatagaggtagagctgaGGGTATTATGGCTGCAGTCACACAAcacagggatagaggtagagctgaGGGTA

Function

NR:

description
beta,beta-carotene 9',10'-oxygenase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU549918 False 1349 TUCP 0.49 2 19933244 19935726
TU549920 True 783 lncRNA 0.49 4 19933244 19935726

Neighbor

gene id symbol gene type direction distance location
LOC110525416 NA coding downstream 21861 19902009 ~ 19911383 (-)
LOC110525415 LOC106585361 coding downstream 71583 19844099 ~ 19861661 (-)
LOC118964858 NA coding downstream 348045 19583832 ~ 19585199 (-)
LOC110525409 ci085 coding downstream 429741 19492087 ~ 19503503 (-)
LOC110525408 LOC106585354 coding downstream 441171 19473103 ~ 19492073 (-)
LOC110525419 LOC106585366 coding upstream 142972 20076288 ~ 20131730 (-)
LOC118964851 NA coding upstream 161323 20097049 ~ 20101296 (-)
LOC110525421 LOC106585369 coding upstream 516518 20452244 ~ 20464287 (-)
zgc:152968 LOC106585374 coding upstream 602030 20537756 ~ 20551306 (-)
LOC110525430 LOC106585377 coding upstream 630689 20566415 ~ 20583005 (-)
G483832 NA non-coding downstream 67887 19865138 ~ 19865357 (-)
G483830 NA non-coding downstream 69991 19862995 ~ 19863253 (-)
G483192 NA non-coding downstream 119159 19812912 ~ 19814085 (-)
G483145 NA non-coding downstream 220324 19710075 ~ 19720616 (-)
G484026 NA non-coding upstream 265017 20200743 ~ 20200947 (-)
G484027 NA non-coding upstream 265385 20201111 ~ 20201334 (-)
G484032 NA non-coding upstream 270939 20206665 ~ 20207280 (-)
G482907 LOC106585357 other downstream 359817 19569207 ~ 19573427 (-)
G482658 NA other downstream 622251 19310423 ~ 19310993 (-)
G482483 NA other downstream 741787 19191132 ~ 19191457 (-)
G482323 NA other downstream 969353 18957486 ~ 18963891 (-)
G484175 NA other upstream 503581 20439307 ~ 20439684 (-)
LOC110525433 ccng2 other upstream 648495 20584162 ~ 20591588 (-)
G484232 NA other upstream 652536 20588262 ~ 20608736 (-)
G484409 NA other upstream 1071290 21007016 ~ 21009082 (-)
LOC110525458 LOC106585411 other upstream 1184250 21115008 ~ 21121728 (-)

Expression


Co-expression Network