XLOC_024248


Basic Information

Item Value
gene id XLOC_024248
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 34510588 ~ 34523239 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049275
CAAGCAACCGCAGAAGTCTCACCAACCCCCATCTTTTATTcatctttcatttttaaaaccctCTCGCATATTTCTAACGGACCAGCACAAAGAAAATAATCGAATTACACGCGAATGCGCGACTTTTGGACCTAGTGCTGCCTACACGCGAAGTCCTGCCAGTGACTTCGCAAACCAGCACCAAGAGTATAGCCTGCAAGACTTTAATGAGCGATTACATCATGATGTGGCTTTTTTGGGGACATCTGAACTCGCCAGACTGAGCTGAAGAAATAAGATGGAGTTTTCCATGTCAT

Function

GO:

id name namespace
GO:0043269 regulation of ion transport biological_process
GO:1903305 regulation of regulated secretory pathway biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049275 True 296 lncRNA 0.45 2 34510588 34523239

Neighbor

gene id symbol gene type direction distance location
XLOC_024247 NA coding upstream 22780 34477938 ~ 34487808 (+)
XLOC_024246 OTUD7A coding upstream 52136 34407529 ~ 34458452 (+)
XLOC_024245 bnip2 coding upstream 242149 34246625 ~ 34268439 (+)
XLOC_024244 NA coding upstream 372245 34054756 ~ 34138343 (+)
XLOC_024243 NA coding upstream 460186 34035503 ~ 34050402 (+)
XLOC_024250 trpm1b coding downstream 52828 34576067 ~ 34615463 (+)
XLOC_024251 rps27l coding downstream 118297 34641536 ~ 34650374 (+)
XLOC_024252 NA coding downstream 145467 34668706 ~ 34669702 (+)
XLOC_024253 wwp2 coding downstream 224886 34748125 ~ 34805144 (+)
XLOC_024254 mir140 coding downstream 268123 34791362 ~ 34791466 (+)
XLOC_023973 CR762411.1 misc upstream 19292479 15217824 ~ 15218109 (+)
XLOC_024239 CABZ01071679.1 non-coding upstream 729960 33780513 ~ 33780628 (+)
XLOC_024238 CABZ01071677.1 non-coding upstream 781190 33729284 ~ 33729398 (+)
XLOC_024261 NA non-coding downstream 431161 34954400 ~ 34960247 (+)
XLOC_024264 NA non-coding downstream 522461 35045700 ~ 35125945 (+)
XLOC_024275 NA non-coding downstream 598080 35121319 ~ 35153715 (+)

Expression


Co-expression Network