G496965



Basic Information


Item Value
gene id G496965
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32100738 ~ 32100944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU564622
ggaggacctgagccctaggaccatgcctcaggactacctggcatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgcctgtggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacatgctgttttcaactctctagacacagcaggagcggtagagatactct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU564622 True 207 lncRNA 0.57 1 32100738 32100944

Neighbor


gene id symbol gene type direction distance location
LOC110525023 NA coding downstream 19972 32074123 ~ 32080766 (-)
epg5 epg5 coding downstream 28891 32049187 ~ 32071847 (-)
LOC110517556 dnajb5 coding downstream 67068 32021741 ~ 32033670 (-)
LOC110525767 LOC106584919 coding downstream 116049 31973832 ~ 31984689 (-)
srrd srrd coding downstream 153345 31944549 ~ 31947393 (-)
slc14a2 LOC106585019 coding upstream 159402 32260346 ~ 32274147 (-)
setbp1 setbp1 coding upstream 219551 32320495 ~ 32378525 (-)
thbs4a LOC106585023 coding upstream 368368 32469312 ~ 32482950 (-)
LOC110526888 LOC106585027 coding upstream 407736 32508680 ~ 32520900 (-)
LOC110525784 LOC106585031 coding upstream 579093 32680037 ~ 32682899 (-)
G496964 NA non-coding downstream 178 32100275 ~ 32100560 (-)
G496960 NA non-coding downstream 3056 32097439 ~ 32097682 (-)
G496957 NA non-coding downstream 6018 32094480 ~ 32094720 (-)
G496956 NA non-coding downstream 6976 32093448 ~ 32093762 (-)
G496950 NA non-coding downstream 17635 32082887 ~ 32083103 (-)
G496966 NA non-coding upstream 1019 32101963 ~ 32102240 (-)
G496982 NA non-coding upstream 31354 32132298 ~ 32135332 (-)
G496993 NA non-coding upstream 54736 32155680 ~ 32189107 (-)
G497013 NA non-coding upstream 100862 32201806 ~ 32203375 (-)
G497021 NA non-coding upstream 126085 32227029 ~ 32228393 (-)
G496851 NA other downstream 208089 31843463 ~ 31892649 (-)
G496777 NA other downstream 428811 31670978 ~ 31671927 (-)
G496772 NA other downstream 439120 31661393 ~ 31661618 (-)
G495560 NA other downstream 1525165 30575118 ~ 30575573 (-)
G495554 NA other downstream 1551288 30545402 ~ 30549450 (-)
G498484 rpl6 other upstream 1226563 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 1231706 33332650 ~ 33336818 (-)
G498960 NA other upstream 1939415 34040359 ~ 34041174 (-)
G501142 NA other upstream 3664422 35765366 ~ 35767929 (-)

Expression



Co-expression Network