XLOC_024922



Basic Information


Item Value
gene id XLOC_024922
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 522658 ~ 523822 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052518
CAGGAGGCATGTTCTGAATTCCACTTCCTGTGTGGGTGTGTGCTGGCAATGGCTTTTAGCCTGCctggtgtatgtgtgtttccatcAGTGTTTGGACTGATTGGACGACTGACTGCCCCACTGTCAGTTTGTGTGGTTGAAGACTTTTTATATCAATCTGTGAATTTGGTATAAGAGCACCTCATTCATGATTGGAGCTGGGGGCCCACGGGTGAAGGAACCTTTTTGGTGGTGGTGCTGTGCCAGTGTGTGCTGTGGGACTCTTCTGATGCATCAGGGTGTGTGACTGGAGTGTGCTGTGGTGAAAGTGGGTGGCGTATAACTTGTTCACGGGTGATCACTCCTGTGGGTAGCCCCAGTCCTGTGAGTGATGGCTCTATTTGGGAACATTGATTTGGAGAGTATGATATTGAGTATTTTCTGTGTGCGGGTTGAATGATAACCACTTTCAGTGCCTTTTGTGAGTAAGCCCTCCAGAGTGGACTGGTTATCAGGACCTATTTTAGTGTTAGCCTTTTTTAAAGAATTGTGAATAAAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052518 True 538 lncRNA 0.47 3 522658 523822

Neighbor


gene id symbol gene type direction distance location
XLOC_024921 NA coding upstream 47694 472181 ~ 474964 (+)
XLOC_024919 si:dkey-167k11.5 coding upstream 68492 431208 ~ 454166 (+)
XLOC_024918 CU394254.3 coding upstream 99920 420342 ~ 422738 (+)
XLOC_024917 NA coding upstream 145049 377326 ~ 377609 (+)
XLOC_024916 NA coding upstream 158341 349707 ~ 364317 (+)
XLOC_024923 CR792453.2 coding downstream 9040 532862 ~ 545668 (+)
XLOC_024924 CR792453.3 coding downstream 88610 612432 ~ 622553 (+)
XLOC_024925 dicp1.1 coding downstream 110860 634682 ~ 774223 (+)
XLOC_024926 NA coding downstream 183262 707084 ~ 763687 (+)
XLOC_024927 AL929520.3 coding downstream 185571 709393 ~ 800315 (+)
XLOC_025429 BX649540.1 misc downstream 29724917 30248739 ~ 30249036 (+)
XLOC_024912 NA non-coding upstream 375725 99666 ~ 146933 (+)
XLOC_024931 FP102888.2 non-coding downstream 318911 842733 ~ 854630 (+)
XLOC_024933 FP102809.1 non-coding downstream 382697 906519 ~ 909941 (+)
XLOC_024934 NA non-coding downstream 401861 925683 ~ 934071 (+)
XLOC_024936 NA non-coding downstream 463059 986881 ~ 988055 (+)

Expression



Co-expression Network