XLOC_024916


Basic Information

Item Value
gene id XLOC_024916
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 349707 ~ 364317 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052516
TGAGCTCTTCATCTGCATACTCTCTGAATTTGTTGAGCCAGTCCACACACTCTTTCTCCAGGTAGCCTTTGGTGTATTGGTTCAGGATGGGCACATTGTCCCATTTTCTCTTGGTTGGCAGCGCTTCTTTCACTGGGGCGACCCACTGAGACTCTGCCTCATCAAAAGACAGGAAGTTTTCTCCATCATAGCCATACTCGCTAACGCCTTTGGAAAACTTCACTTCACTTCCTTGTATTTCCACTTCACAGCCGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052516 True 255 lncRNA 0.47 2 349707 364317

Neighbor

gene id symbol gene type direction distance location
XLOC_024913 FP326649.1 coding upstream 36177 155659 ~ 313530 (+)
XLOC_024915 KDELR3 coding upstream 47485 301479 ~ 302222 (+)
XLOC_024914 zgc:174288 coding upstream 99562 240636 ~ 250145 (+)
XLOC_024912 NA coding upstream 202774 99666 ~ 146933 (+)
XLOC_024911 NA coding upstream 217541 5513 ~ 132166 (+)
XLOC_024917 NA coding downstream 13009 377326 ~ 377609 (+)
XLOC_024918 CU394254.3 coding downstream 56025 420342 ~ 422738 (+)
XLOC_024919 si:dkey-167k11.5 coding downstream 66891 431208 ~ 454166 (+)
XLOC_024920 dicp1.1 coding downstream 99810 464127 ~ 630986 (+)
XLOC_024921 NA coding downstream 107864 472181 ~ 474964 (+)
XLOC_025429 BX649540.1 misc downstream 29884422 30248739 ~ 30249036 (+)
XLOC_024922 NA non-coding downstream 158341 522658 ~ 523822 (+)
XLOC_024926 NA non-coding downstream 342767 707084 ~ 763687 (+)

Expression


Co-expression Network