npepl1 (npepl1)


Basic Information

Item Value
gene id npepl1
gene name npepl1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64833274 ~ 64842996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021610137.2
TGCGATAAAGTGCAAAGGGCATCAATCCATCGGTTTGTCCAAAGATGGCGAACGTGGTGCTCGAGTTCAAGGCTTCTGCTGGAGATTCGGAGCCTCAAAATCGCCCTGTCCTGATTGTCGGTCAACTGAATAACTTGGCCCAAACAAACTGGACCCAGGTCAAGGGGAAATTGCAGCCAGCTGTCAGCGAAAAGGTCTGGCAGGCTGCTCTCACTgctctgaaccctaaccctactgacaGCTGCCCTCTGTACTTGAGCCATGCAGCTGTGGCAGCCCTGCCCTCACGGGTTAGCAGACACAACAGCCCTTCCTCTGCCCACTTCCTTTCCCGTCTGGTCCGTACCTGCCTGCCTGGAGGGACAAGCCGCTGCATCCTGGTGGTGTGTGAGCGGTCTGATGTGTTTGCCTCAGCCTGTGCCATCGCCCGGGCTTTCCCCATATTCTCCCGTCGTTCTGCCTCCTCCCGCAGGACCGAGAAGAAAGAAGTCACTGTGGAGTTCATCACTGTGGGCCAAGACAACGGACCACTGGACCCCACTATACTGCAGTGTCTTGCCAATGCTGCTGATGGAGTGAGACTGGCAGCACGGATTGTGGACACACCGTGCAATGAGATGAATACTGATCACTTCTTGGAGGAGATTAAGGCAGTGGGAACTGAACTGGGCATTTCTCCTGTTATCATTCGAGGAGAGGAACTGAAACAGAAAGGATTTGGAGGCATCTATGGCGTGGGCAAGGCAGCGGTGAACCCCCCTGCTCTGGCAGTCCTGAGCCACAAACCAGATGGCGCCACCCAGACTATTGCATGGGTGGGCAAGGGAATTGTATATGACACTGGAGGCCTCAGCATCAAGGGAAAGACCAACATGCCTGGGATGAAGAGAGACTGTGGTGGGGCAGCAGCCATTTTAGGAGCTTTCAAAGCTACTGTCAAACAGGGCTTCAAAGACAATCTCCATGCCGTATTCTGCCTGGCAGAGAATGCAGTCGGACCCGCTGCAACACGGCCAGATGACATCCACACACTCTACTCTGGAAAGACCGTGGAGATCAACAACACTGATGCCGAGGGCAGGCTGGTGCTGTCTGATGGTGTGGTGTATGCCAGCAAGGACCTCTCTGCTGACATCATCCTGGATATGGCCACCCTGACAGGGGCACAGGGGATCTCCACAGGGAAGTACCATTGTGCTGTGATGACCAACAGTGAGCAGTGGGAGATGGCATGTGTGAGTGCAGGCCGCAGCAGCGGAGACCTGGCTCACCCACTGGTCTACTGCCCAGAGCTGCACTTCAGTGAGTTCACCTCAGCCGTGGCAGACATGAAGAACTCTGTGGCTGACCGGGAGAATGCTACGAGCTCCTGTGCCGGCCTCTTCATCGGCTCTCACCTGGGCTTCGACTGGCCTGGGGTCTGGGTCCATGTGGACATAGCCTCCCCCGTCCATGCTGGGGAGCGTGCTACTGGCTTCGGCGTGGCTCTGCTCATGGCTCTGTTCGGCCAGGCTTCCGACGACCCTATGCTCAACCAGGTTTCTCCTCTGGGGGCGGCCAGAATGAATGCTGCATCCGGGGACCCGATGGTGCGCGACAGCAAAAGACGCAGACTGGTGTAAAACCTCTAAACAGCCACCTCTAGACTCCTCTGCCTCACGAACTCCAGACCCACACACCTCCCCTCTTtacactgacatgcactgttcaCCTAGAAAGCATTTCCAATCGTCAATTCTTAGTCTACTTCTTCACGATGCAGtgaacaaaatgtggggaaaaagAGCAGGTGGCTAGAATTTCTCTCAGATTTGTTTGTGTTGTATTTCATTGACTGTCTTTTGATTATTTGTCCCACAAAGAATTGTGAGGAATTATGAATGTGCAAATGTTTATAGCATGTTGTAGACTTAAAGGTTTTGCTGTCCTTGAATATATTACAAGAGCATTATCACAATTTCTGAAAATGAAATCAAAATAGTCTGAAATTGACTGTTAAAATAACTGAATGAGGTATGTGATCCAAGCGATCCTGTGAGCTAAGTGATTGTTTCCTTTTTCGTTCAATGTGTGTCTTGAGTAAATTCGCTAGGCAAACACATATTTTGCAGCCATAGCTTATCCACTGTTGCCAAACTTGTCTTTATGGACATTGGGAATAACTTGTGAATAATAAAGAGATCTTTTGGAGTAATCTTA

Function

symbol description
npepl1 Predicted to enable manganese ion binding activity and metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in cytoplasm. Is expressed in female organism. Orthologous to human NPEPL1 (aminopeptidase like 1).

NR:

description
probable aminopeptidase NPEPL1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function
GO:0008235 metalloexopeptidase activity molecular_function

KEGG:

id description
K09611 NPEPL1; probable aminopeptidase NPEPL1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021610137.2 True 2199 mRNA 0.51 12 64833274 64842996

Neighbor

gene id symbol gene type direction distance location
LOC110528243 stx16 coding upstream 2239 64815994 ~ 64831035 (+)
LOC110528241 LOC106583266 coding upstream 85001 64745278 ~ 64748273 (+)
LOC110528238 LOC106583272 coding upstream 177524 64652754 ~ 64655750 (+)
LOC110528236 LOC106583269 coding upstream 195423 64534107 ~ 64637851 (+)
LOC110528234 LOC106583274 coding upstream 317250 64494672 ~ 64516024 (+)
ctsz LOC106583261 coding downstream 284 64843280 ~ 64858614 (+)
LOC110528999 olfml3 coding downstream 141623 64984619 ~ 64987080 (+)
LOC110528254 LOC106583349 coding downstream 234901 65077897 ~ 65081518 (+)
LOC110528253 LOC106583348 coding downstream 239073 65082069 ~ 65097635 (+)
LOC110528255 LOC106583345 coding downstream 272927 65115923 ~ 65160135 (+)
G635641 NA non-coding upstream 35632 64796946 ~ 64797642 (+)
G635637 NA non-coding upstream 41594 64791359 ~ 64791680 (+)
G635633 NA non-coding upstream 50271 64782512 ~ 64783003 (+)
G635631 NA non-coding upstream 52464 64780513 ~ 64780810 (+)
G635556 NA non-coding upstream 71350 64759637 ~ 64761924 (+)
G635666 NA non-coding downstream 75876 64918872 ~ 64919418 (+)
G635670 NA non-coding downstream 80671 64923667 ~ 64923976 (+)
G635683 NA non-coding downstream 96616 64939612 ~ 64939827 (+)
G635684 NA non-coding downstream 96866 64939862 ~ 64940110 (+)
G635738 NA non-coding downstream 161823 65004819 ~ 65028683 (+)
G635635 NA other upstream 46881 64785216 ~ 64786393 (+)
G635332 LOC100380681 other upstream 507015 64318200 ~ 64326259 (+)
LOC110528222 LOC106583247 other upstream 632042 64099788 ~ 64201232 (+)
LOC110528206 hoxc6 other upstream 1211743 63619980 ~ 63622602 (+)
G633613 NA other upstream 1903575 62929398 ~ 62929699 (+)
G635769 NA other downstream 208648 65051644 ~ 65052156 (+)
G635848 NA other downstream 486940 65329936 ~ 65330292 (+)
LOC110528281 LOC106565490 other downstream 1061149 65901905 ~ 65908098 (+)
G637929 NA other downstream 1709592 66552588 ~ 66607744 (+)
G638011 NA other downstream 1778690 66621686 ~ 66622094 (+)

Expression


Co-expression Network