G635556


Basic Information

Item Value
gene id G635556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 64759637 ~ 64761924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU722457
TCCATGTTTGTTTTGATTTTTATTTTTGATACATGGTGTTGCTTTATTCAGTAGTGAGACAGACACTGTCGTATAGCTTATATCTACAGTATGCTTCACTTGGTTCTGCTGGGTTCAAACACACCTCTAGTCAGAACAATGCACTGCTAAGAGAGTCTGCCTGCCTgtattacacagagagagagatgcactggtGTGACACTACAGATAGTTACATTTGAGTAGCAAGGGGCATGTTATTAGTACCACATTACAAAACGTCTACCACAGTGTTAGACAATTGGCAAAACTCTCAATTAAAAGATATGCGAGAATTCTTTAATTACTCGCCATAACAAGGATATTACACTTAAAAAGTTTGTCCTTCCTAGTCACATCAAATTGTACATACGTGTCCATTCCAAAGCCTCACTTCTAGTGGGGAACAACCCCAATTTACGTACAGATTATATTAACAGTTTTGAAGTCAAAACACATGCACTCTGAAAAAAATCAGTTTGAATGGAGAGATGTGTGTTGAAAATACTGACTAAAAGAGGTAATTTTTAAATTATGCTCAACCCAAACTAAAAGTGTTCTCTTCCCATGGTTTCTTTTGCTGAAAAGGTGAGAACTGTAATTATaatgaacaaaaatctaaaatgaattaaataataCAGCAAGGAGAGATATACTTCAGTTCTACATTTGACCAAATAATCATAAATGGTGTCTTCACACAGAGGTACAATAACGGAAAAAAGTAAATTACCAAACAGAACGATAGCAGCTGCCAAATACTGTAGACTTCAGCTTATTATGTCAGCAGGTTAAGAATTGCCCTTTTGCCAGATCATAACTTGTCACATCTTAACCTGGAATAGGACTGCAATAATTTGAGAAATAGAATTCAAACTTAATTTTCCAATTGAAAAGCATAAGAATGTCACACTGCTTGAGCATGAAAATACAGGAGATAGGATATAAACTATAACTGAACCCTGAGGACTCTAAAAAGGGACAGGGGGTCGTCGTAATTGGGTTTTACATAATAAACCCCACATACCAGTAGCTCAACAGAACACGATAAAACCATTAGAACAGTGGAGGGAAAATGTTCTCTGAAGTGTTGATCTCATGATTAGAGATATCGGGATAGGTCTTAAGATCTCTCTATAAAAAGGTGTACGTCTCTCTCAAAGCCTGAAGGACATGACAGACCAACAAGAACATTATGTGCAGCGAGTGCGTCATTTTCTGTTCATTTTCCAACGATTCTACATCTCCAACGTTTGTCGACACCTAGCAGGTGATCTGCTGTGCACAGCCAACGTTCGTCTTGGTCTGTCTTGTCCTTTAAAACAATGTCCTGTTCCATTTTAGGTGTCATACGCTGGCTGTTCCTCAATGAACACAGCGTGGCAGTTGTTGCTTACCCTGTTGCCCAGACAGGACACGTCCAGACAGGACACACCGAGGGCTATCAGACACTGCCACG

Function

NR:

description
natural resistance associated macrophage protein beta, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU722457 True 1477 lncRNA 0.39 2 64759637 64761924

Neighbor

gene id symbol gene type direction distance location
LOC110528241 LOC106583266 coding upstream 11364 64745278 ~ 64748273 (+)
LOC110528238 LOC106583272 coding upstream 103887 64652754 ~ 64655750 (+)
LOC110528236 LOC106583269 coding upstream 121786 64534107 ~ 64637851 (+)
LOC110528234 LOC106583274 coding upstream 243613 64494672 ~ 64516024 (+)
LOC110528232 LOC106583276 coding upstream 324718 64368357 ~ 64434919 (+)
LOC110528243 stx16 coding downstream 54070 64815994 ~ 64831035 (+)
npepl1 npepl1 coding downstream 71350 64833274 ~ 64842996 (+)
ctsz LOC106583261 coding downstream 81356 64843280 ~ 64858614 (+)
LOC110528999 olfml3 coding downstream 222695 64984619 ~ 64987080 (+)
LOC110528254 LOC106583349 coding downstream 315973 65077897 ~ 65081518 (+)
G635618 NA non-coding upstream 6232 64753129 ~ 64753405 (+)
G635552 NA non-coding upstream 8753 64749912 ~ 64750884 (+)
G635549 NA non-coding upstream 9908 64748635 ~ 64749729 (+)
G635610 NA non-coding upstream 24026 64735347 ~ 64735611 (+)
G635631 NA non-coding downstream 18589 64780513 ~ 64780810 (+)
G635633 NA non-coding downstream 20588 64782512 ~ 64783003 (+)
G635637 NA non-coding downstream 29435 64791359 ~ 64791680 (+)
G635641 NA non-coding downstream 35022 64796946 ~ 64797642 (+)
G635666 NA non-coding downstream 156948 64918872 ~ 64919418 (+)
G635332 LOC100380681 other upstream 433378 64318200 ~ 64326259 (+)
LOC110528222 LOC106583247 other upstream 558405 64099788 ~ 64201232 (+)
LOC110528206 hoxc6 other upstream 1138106 63619980 ~ 63622602 (+)
G633613 NA other upstream 1829938 62929398 ~ 62929699 (+)
LOC110528175 LOC105017014 other upstream 2417672 62325429 ~ 62342019 (+)
G635635 NA other downstream 23292 64785216 ~ 64786393 (+)
G635769 NA other downstream 289720 65051644 ~ 65052156 (+)
G635848 NA other downstream 568012 65329936 ~ 65330292 (+)
LOC110528281 LOC106565490 other downstream 1142221 65901905 ~ 65908098 (+)
G637929 NA other downstream 1790664 66552588 ~ 66607744 (+)

Expression


Co-expression Network