XLOC_024969


Basic Information

Item Value
gene id XLOC_024969
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 2570069 ~ 3312024 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052536
atatgtatatataaattaaagcACAGGTGAACAGATAAGCTGTTGTACAAatgaacttgaattgaattaaataaaaatgaaattgtgctttgtgctttatggttttcgctggagtctaacagtattgagGTTCAGATATTTAATAATCTAATGTAAATACCCAGTATATTCCTCACTGTATAAATTATTTAACTGTGTTAAAGAAGCACCCGTCATCATTTCTTGTGTCGTAACGGTTTAACTTGAAATCTCTTGACGTCCTGCGATGTGACAACTGCAGATTCACACACTGagcgatatcaatgctaaaacgatatattatGCAGCTCTACTTTATTCctataattacatatatatatatatatatatatatatatatatatat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052536 True 385 lncRNA 0.29 2 2570069 3312024

Neighbor

gene id symbol gene type direction distance location
XLOC_024967 NA coding upstream 426124 2142629 ~ 2143945 (+)
XLOC_024966 zgc:165583 coding upstream 626437 1942219 ~ 1943632 (+)
XLOC_024965 NA coding upstream 757806 1811391 ~ 1812263 (+)
XLOC_024964 BX321875.1 coding upstream 765587 1782815 ~ 1804482 (+)
XLOC_024963 si:dkeyp-52c3.7 coding upstream 808089 1749793 ~ 1761980 (+)
XLOC_024982 zgc:165453 coding downstream 142586 3454610 ~ 3465646 (+)
XLOC_024983 zgc:171426 coding downstream 157576 3469600 ~ 3481763 (+)
XLOC_024984 NA coding downstream 170978 3483002 ~ 3489660 (+)
XLOC_024985 cdc42ep1b coding downstream 207583 3519607 ~ 3528258 (+)
XLOC_024986 CR589947.1 coding downstream 233801 3545825 ~ 3550612 (+)
XLOC_025429 BX649540.1 misc downstream 26936715 30248739 ~ 30249036 (+)
XLOC_024958 NA non-coding upstream 936851 1631812 ~ 1633218 (+)
XLOC_024957 NA non-coding upstream 938265 1630577 ~ 1631804 (+)
XLOC_024987 NA non-coding downstream 259803 3571827 ~ 3572831 (+)
XLOC_024992 NA non-coding downstream 357610 3669634 ~ 3674174 (+)
XLOC_024999 BX005421.3 non-coding downstream 735765 4047789 ~ 4214905 (+)
XLOC_025002 NA non-coding downstream 925812 4237836 ~ 4294925 (+)

Expression


Co-expression Network