XLOC_024982 (zgc:165453)


Basic Information

Item Value
gene id XLOC_024982
gene name zgc:165453
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 3454610 ~ 3465646 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049528
CTCTTCTTGGTGACGTTTCCTTCACTGATTGAGTCTGACACTGAAGCTAAACTGTGCGCTAGTCTTCTGAAGCCCAAAGGGAGTGTCACAATGACCATTTCTCTGGTCGATGAGAAAAGCACCGAAATTCAACTTGTGCAGCAGACGTCCGGGAGGAAGTTTCACAGATGTTTTCATTTCCAGGCTCCTCAAGTAAGTGGAGATTCAGTGCAGACTGTGAGGGTGGTCATTCAAGGACAGTCCTTCAAAATGACTGAAGAGAGTAAAGTTATGTTCAGGTCTTACCTGCCGCTGACCTTCATCCAGACAGACAAACCGCTCTACAATCCAGGACAGAGGGTTAATTTCAGAGTTCTTACAATGAGTGATACATTTGTGCCCCAAGACCAAATGTACAGTCTGGTGGTGGTGGAGGACAATAACAAGATCCGGATTCGTCAGTGGACCGACATTTCCTCCACAAACTGGATACTGGAGCTTTCTCATGTTTTAGACAAAGAAGCTCAGGTTGGGACGTACACACTAAAGGCTTATATTGGCGATCGAACTATCTCCCAGAGTTTCGATGTGAAGAAATATGTTTTGCCCAAGTTTGACATGACCCTGAACACACCGCAGACGTATAATGTTGCAGATGTGGGACTGAAAGTTGAGGCTTGTGCAAAATACACATATGGGCAGCCTGTACCTGGTCAAGTGTCTGTGAACCTGTGCCGTCAGCATTTTACCTTCATTCAAGATCCTAAAGTGACCATTTGTCTGAATGAAACTGCTTTGATGGACGACACCGGCTGTACCTCTCTAACATTCAGTACATCAACATTTTTTGGCACCAGTTTGGAGAGTAGCCTGCAGAATTCCTTCGTTGTTAATGTCAACCTCACTGAGCAGGGAACAGATGTTGTCATGTCAAAATCTGCAACTGTGTCGATTACATATGAAGTTGGCAAGGTCACATTTGTGGATCTCCCAAAGTTCTATGATTATGGGTCAACGATTAATGCAAAGGCGATGTCTGATTTCAATGGCAACGCAATCAGTAACAAGGTAGTCTATCTGCTGGACCACGGCCAGTGGAGACCCAAAGTGCTCTTCAATGTGACCACAGATGAAAGCGGACTTGCAGAATTCTCCCTCAACACCACTAATTTTCCTAAAGCGAATCTGTACCTTGTGGCAAGTGTAATTCCTCAGCTTTGGTTTAATGATAATTCACCACACTTCACAACAGATTCACAGGTGGTTCAGCTTTCCCAAACTGCTGCTCCTGACAACCCAACCTATAGTGATCTGTCTATAGTGAGTCTACAGCAGCCGCTTAAATGTGGCACCACTTATCCAGTGACTGTCAAGTACACATTTGTTGGAGAGACTGGCGACTACAGTGCTGACATCATCTATATGGTCATGTCCAGAGGAGTGATCGTTCTGCATGGGTTTAAAACCGTTCAAGCTTGGGCTTCTGACACCCTCACGACTGGCACGGTGACGTTTGATCTCCCAGTCCATGCAAAGATGGCTCCGATGGTTCAGATTCTAGTCTTTAGTGTTCTGCCCAGTGAGACTGTAGTGACTGGTAGTGCATCGTTTGACACTGAGAAGTGCTTCTCAAACCAGGTTTCTCTGCAGTTCTCTCCTGCTACAGCGGTTCCTGGTGAGGGAAGTATTTTGACCGTCTCCGCTCAAGCTGGATCTCTGTGTGGCCTCAGTGCTATAGATCAGAGTGTTCTGATCATGCAGTCAGGAGGACGTCTGAGCGCAGAGGCGATGTTTAACTTGCTCCCAGTGCGCTCCTTATCTGATTATCCACCTGGTGTTGAAGATCAACAGAACTGCCTGAATGTTCGACCTCTTCGAGATGTGCCAACAGATCAAGCTTATAACACCTTTAAGggTGTGGGGATTAAGACTGCAACAAATCTGCCGGTTCGAGAACCTCCGTGCCTGACATACAGAGGGCTGAGCTACTATCGCAACTTCCCGGGTGttTTGTATTCACCAGTAGAATCTTCTGATCTGGTTCTAAATGCTCCTGTACCTGTAGAACTAGGAGAACTTGTTAGAGGTGACAGTGGTTCCTCTGCTGTGACCATCAGGACTTACTTTCCAGAAACCTGGATTTGGCAACTTGTTACTGTGGGaGACTCTGGGTCCACGTCAGTTCCCCTCACAGTTCCTGACACAATCACTGCATGGGACACCGAGGCCTTCTGTCTAGCCTCCAGTGGTTTTGGTCTGGCTCCACCAGTTCTGCTGACTTCCTTCCAGCCCTTCTTTCTGGAGATCACCCTGCCTTACTCCATAATCCGTGGGGAGATTTTAAATCTGAAGGCCACTGTCTTTAATTATCTGCCCCAATGCATCAAGGTTCAAGTGACTCCAACACCATCCTCCAACTTCACTCTTAAATCCTTTGGTCACTATTCATCCCATCTCTCTGCCAATGGGAGAAAGACCTTCAAATGGGATTTAACTGCTTCTGTTATTGGAACTATAAATGTGACCATCAGTGCCCAGGCCAGCCCATCAGAGCAATTGTGTGACAATCAGCTTGTGACTGTACCATCAAGAGGACACACTGACATCGTCACTCGAAGTCTGCTGGTTCTGGCTGAAGGAGTTGAAAGGACCTTCATCCGGAATTGGTTACTCTGTCCAAAGGGTTACATTCTTTCAGAGAGCGTGAAGATCACATTTCCAACAAAAGTCATCCAGGGATCAGCCAGATGCTCCGTATCAGCCATAGGGGACATCATGGGTCGTGCACTGAAGAATTTGGCAAACTTGCTACAGATGCCTTATGGCTGTGGAGAACAGAACATGATCATTCTCGCTCCCAATATTTACACTCTGCAGTATCTGAAAGTAACGGCACAGCTCACCCCAGCCATCCAAGACACTGCCGCGAGTTATCTTCTGAGTGGATATCAAAGAGAGCTGAACTACAGGCACAGCGACGGTTCATTCAGCACTTTTCCTTATTCACCATCCAATACATGgtTGACTACCTTTGTCATGAGGACTTTTGGCCTAGCAAGGAACTTCACCTACATAGATCCCAATGTCCTTCAGAGCGCAAAGGACTGGTTGATTGGCACGCAGGGTTCAGATGGTTGTTTTGTGCAACAGGGGACTCTGTACCACAAAGACATGAAGGGTGGGGTTGATGATAACGTAACCATGACTGGCTACATCGTTGCATCAATGCTTGAAATTGGAGTTCCAGTCACGGATCCTGTCATTACGAAGGCTCTGTCGTTTTTGAGGCCTCTTGTTGGGAATCTGGGAAACACCTATGTAACTGCTCTGCTGGCCTACACCTTCAGTCTGGCTGGAGAGACCAGCACTCGAGCACAGCTTTTAAATTCCTTGAGAAACACTGCCATTTCTGAAGGTACTACTCTCCACTGGTCTCAGACGACATCTGGGGATACTCTGGCAGTGGAGATCAGTGCATATGTGCTGCTAGCGGTTCTAACTGTACAGCCTGTGACCACTGCTAATCTGGGCTATGCTAACCGCATTGTCAACTGGCTCGTGGCCCAGCAGAATCCCTATGGTGGTTTCTCCTCCACTCAGGACACCGTGGTGGCACTTCAGGCCTTGTCTATGTATGCTGCACAAGTCTTCAGCCCTGGAGGCTCCAGCACCGTTACAGTTCAGTCCTCAGTGCCAGCAGGTGATGTGTTCAACTTTGACGTGACTCCCAACAACCGCCTGCTGTACCAGGAGAGTCCACTGAATAACTTTCCAGGCACATACAGTGTTGTAGCAGCTGGAGCTGCCTGTGCTTCTGTACAGGTTTTATGTTTCTACAACATCCCGACTCCTGTTAGAGTTTCTAAAACACTGAGTGTTGTTGCGAAGGTGTCTGGAAACTGCCAGGCTACACCAGTCAATCTGATGTTGACCTTTACGGCCAAATACACTGGTCCAAAACCAACTACTAACATGGTTCTGGTGGACATCAAGCTCTTGTCAGGATTCACTGCAGACACCTCACTGCTTGGATCTCCACCCAATTTCGCTCCGTTAGTGCAGAGGGTTGATTCTGAAGGTGATCATGTCCTTATCTATCTACAAGAGgTTCCCAAAGGTGTTCCAGTGACCTTCAGTATACAGCTGACACAGACTGTTGCAGTGCAGAATCTCAAGCCAGCGGTCATCAATATCTATGACTATTACCAGAGAAGTGACAGTTTTGAGACCGCCTACAAGTCCCCCTGTCCATGA

Function

symbol description
zgc:165453 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular space.

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070720-13 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in extracellular space.

Ensembl:

ensembl_id ENSDARG00000078183

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049528 True 4233 mRNA 0.47 33 3454610 3465646

Neighbor

gene id symbol gene type direction distance location
XLOC_024970 NA coding upstream 140414 2570435 ~ 3314196 (+)
XLOC_024969 NA coding upstream 142586 2570069 ~ 3312024 (+)
XLOC_024981 NA coding upstream 173736 3279609 ~ 3280874 (+)
XLOC_024968 NA coding upstream 288416 2473420 ~ 3166194 (+)
XLOC_024980 si:dkey-30g5.1 coding upstream 314636 3139240 ~ 3139974 (+)
XLOC_024983 zgc:171426 coding downstream 3954 3469600 ~ 3481763 (+)
XLOC_024984 NA coding downstream 17356 3483002 ~ 3489660 (+)
XLOC_024985 cdc42ep1b coding downstream 53961 3519607 ~ 3528258 (+)
XLOC_024986 CR589947.1 coding downstream 80179 3545825 ~ 3550612 (+)
XLOC_024987 NA coding downstream 106181 3571827 ~ 3572831 (+)
XLOC_025429 BX649540.1 misc downstream 26783093 30248739 ~ 30249036 (+)
XLOC_024977 NA non-coding upstream 382143 3022061 ~ 3072467 (+)
XLOC_024992 NA non-coding downstream 203988 3669634 ~ 3674174 (+)
XLOC_024999 BX005421.3 non-coding downstream 582143 4047789 ~ 4214905 (+)
XLOC_025002 NA non-coding downstream 772190 4237836 ~ 4294925 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01130080_00000087_00000371 NA coding CI01130080 null 48 ~ 371 (-)