XLOC_025283 (BX649557.1)


Basic Information

Item Value
gene id XLOC_025283
gene name BX649557.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 22568987 ~ 22569106 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049913
gccggcagctagctctctgcaactctcacgtggtcacccactgaagctaagcagggctgcgcctggtcagtacctggatggtagaCCCCATGCCTTATGGTAGAAAGGTAGATgtgggtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098339

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049913 True 120 rRNA 0.58 1 22568987 22569106

Neighbor

gene id symbol gene type direction distance location
XLOC_025282 coa3b coding upstream 17631 22426714 ~ 22551356 (+)
XLOC_025281 arhgap27l coding upstream 146818 22375596 ~ 22422169 (+)
XLOC_025279 ifnphi3 coding upstream 188200 22334012 ~ 22380787 (+)
XLOC_025280 zgc:103564 coding upstream 227881 22335030 ~ 22341106 (+)
XLOC_025278 gh1 coding upstream 236074 22327738 ~ 22332913 (+)
XLOC_025284 tanc2a coding downstream 9263 22578369 ~ 22817455 (+)
XLOC_025285 NA coding downstream 277230 22846336 ~ 22848196 (+)
XLOC_025286 BX322574.1 coding downstream 285567 22854673 ~ 22880447 (+)
XLOC_025287 hdac5 coding downstream 336235 22905341 ~ 22976456 (+)
XLOC_025288 lsm12a coding downstream 414992 22984098 ~ 22994433 (+)
XLOC_025429 BX649540.1 misc downstream 7679633 30248739 ~ 30249036 (+)
XLOC_025276 NA non-coding upstream 406505 22157933 ~ 22162482 (+)
XLOC_025274 NA non-coding upstream 571429 21929928 ~ 21997558 (+)
XLOC_025272 NA non-coding upstream 971079 21378996 ~ 21597908 (+)
XLOC_025271 NA non-coding upstream 1248502 21312584 ~ 21320485 (+)
XLOC_025270 NA non-coding upstream 1317180 21245897 ~ 21251807 (+)
XLOC_025293 NA non-coding downstream 527336 23096442 ~ 23213329 (+)
XLOC_025296 NA non-coding downstream 837365 23406471 ~ 23411521 (+)
XLOC_025298 NA non-coding downstream 948853 23517959 ~ 23524650 (+)

Expression


Co-expression Network