G625426


Basic Information

Item Value
gene id G625426
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 55072479 ~ 55075396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU711185
AATAATGAAAACACTTAATGAGCGATTCAAAGTATATTGACAGCAGATACTTCcacatacagtgctttcggaaagtattcagaccccttggcgtTTTCAAAATTTTGTTaggtaacagccttattctaaaatagattttttttaaatcctcatcaatctgcacacattaccccataatgactaagcaaaacaaaaacagtttcagaaaagtttgctaatttattaaataataaaaaacatttcacatttacataagtattcagtacctttggcagcaattacagcctagagtcttcttgggtatgacgctacaggcttggaacacctgtatttggggagtttctcccattcttttctgcagatcctttcaagctctgtcagattggatggggagcattgctgcacagctattttcaggtctctccagagatgttcgatcgggctcaagtccggggtctggctgggcccctcacggacattcggagacttgtcccgaaaccagtcctgcgttgtcttggctgtgtgctccagacgagatgcttggcattcaggccaaagagttcaagcttggtttcatcagaccagagaatcttgtttctcaaggtctgagagtctttaggtgccttttggcaaactccaagtgggctgtcatgtgcctttactgagaagtgacttctgtctggccactctaccataaagtcctgattggtggagtgctgcagagatggttgtccttctggaaggttctcctatcccaacagaggaactctagagctctgtcagagtgaccattgggttcttggtcacctccctggccaaggccctttttccccgattgctcagtttgtccgggcggccagctctaggacgagtcttgctggtttccaaactttttccatttaagaataatggaggacactgtgttcttggggaccttcagtgccgcagaaatgtttttgtacccttccccagatctgtgcctcgccacaatcctgtctcagagctctatgtgcaattccttcaacctcatggtttggtttttgctctgacatgcacggtcaactgtgggaccttatatagacaggtgtgtgcctttccaaatcgtctccaatcaatttaaatgaacacacaggtggaatccaatcaagttgtagaaatatctcaaggatgatcaatggaaacaggatgcacctgagctcaattttgagactcatagcaaggggtctgaatacttatctaaataaggtatttctgttttttatacatttgcaaacatttctaaaaaactgtttttcgcatttgtcattatggggtattacggctaccatggctatgcccccataggatgacaattcctccatccacagggcacgagtggtcactgaatggtttgatgaggatgacaacgatgtaaaccatatgccatggccgtctcagtcaccagctCTCAACCTAATTGAACacatgggagattctggagcagcgccTGACGCAACATTTTAGCAATTGCTTCCCTCACATAAGCTCGGCTTCACCAATTTGCTGCATATTCTTGGGTAATTTAAGGAAACCACACTGACAATACTCACCCAGTTTCTCCATGATTAATGCACAAGTTGATGTGCATCATTACATTTGACTGTTGTATTTACTGAGGTCACACCAGCACTATCTATGACCTGAGGATGAGGACCAACAAGCCATACATCACCAGATACATtccactatgtactgtatataactagtGATCATATGATACAAATACAACCGTCGGTTTTAGAACCATACAATCAAACGAATAGCCCTTTCAGGACAACACAGCATAACAACATATGACCATTTTAGAAATATCAACTGAGGAAGCACTCTCCCTCTGTATGTTATTGCAGGTCTAAAACCATGCATTGTTGATTGAGACATGGTAGTCACAGTCACTTCCTCAGCATAAAACTCCAGATCCTCCATCCATTCAGTCCATAATGAGGTGTTCTACTGGTCCATCAGATTGATCTTTTCACATTGACTAGTGAGATTGGAGGGGATTCACCGCCCTCTCAGTGAGTCCATTGACTCCAGTTTGTTAGTCATTGAGTCCAGTGAGTGTCAGTGGAGTCCTCTGAGACCTGTTTGTCTAAGGACTCACCTCTGAGCGGATGACAACACCTCCCTGCCAAGAAATGTCACCATGAAATGTCAGGAGCGACTATCTGAACAGAGGAGAATGTCACATGCTGTCCCTGTCCTGTTGTGTTGAGCTGGAGGCCACACAGGAAACAGGGGGGAGGGGAAAGTGTAACATTCTGCTTTATAATGGCATCTCATTGTAATTGGCTGTCTGCCTTCCTGGCCAATGGTAGTCATTGGTCTTGATGGAAGCCTCATCAGACTGTATGATAAGGGAGCGGTTATCCATGTTCTTTTCCCAGTCACTGTCAGTGGGACAGGTGTGGTCTTCACTGCCTGTGTTGTGCGTCCATGGCCATAGAGGTGTCCTCATAGATTTTCAGCATGGTTTCTGTGCGGTCATCATGAAGCTCTTTGGGCTCCTGAAATCTGGTTTGACCAGTATTttacttaattatttatttgacatAGAATTTCTGTATTTTGTATCGATGGAGTTGTAGTTTGTAAGGGAACCGTATATCATTATTACCTTGGTTCTAGGCGCTCTTTAACCTTGGCGATAGACAGGATGTATGGTCCAATCTGTCGGGCGATGGTGGTCAGGTACAAGTTCTCCTGCTTCAGCTGCTGCAGGTCCTGGAGCTGTG

Function

NR:

description
RING finger protein 207-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU711185 True 2774 TUCP 0.44 2 55072479 55075396

Neighbor

gene id symbol gene type direction distance location
LOC110528006 LOC106582975 coding downstream 19692 55047293 ~ 55052787 (-)
LOC110528005 LOC106582976 coding downstream 35981 54998441 ~ 55036498 (-)
LOC110528967 LOC106565901 coding downstream 111423 54807649 ~ 54961056 (-)
LOC110528004 LOC106582978 coding downstream 587266 54202674 ~ 54485213 (-)
LOC110528966 LOC106582980 coding downstream 874267 54194715 ~ 54198212 (-)
LOC110528008 atrap coding upstream 4588 55079890 ~ 55101228 (-)
LOC110528010 LOC106582973 coding upstream 31353 55106749 ~ 55132386 (-)
LOC110528009 LOC106582972 coding upstream 57399 55132795 ~ 55158158 (-)
LOC110528015 NA coding upstream 85526 55160922 ~ 55162246 (-)
LOC110528968 LOC106582963 coding upstream 120458 55195854 ~ 55196454 (-)
G625404 NA non-coding downstream 26388 55044189 ~ 55046091 (-)
G625410 NA non-coding downstream 29605 55042455 ~ 55042874 (-)
G624778 NA non-coding downstream 98041 54974192 ~ 54974438 (-)
G624892 NA non-coding downstream 100497 54971726 ~ 54971982 (-)
G624889 NA non-coding downstream 103608 54968666 ~ 54968871 (-)
G625414 NA non-coding upstream 22347 55097743 ~ 55098277 (-)
G625477 NA non-coding upstream 94998 55170394 ~ 55170660 (-)
G625472 LOC106582968 non-coding upstream 95666 55164492 ~ 55188756 (-)
G622985 NA other downstream 1749648 53305536 ~ 53322831 (-)
G619733 NA other downstream 4113939 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 4766323 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 5136198 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 5775231 49295040 ~ 49297305 (-)
LOC110528020 LOC106582955 other upstream 358060 55420466 ~ 55566988 (-)
G627254 NA other upstream 1615927 56691323 ~ 56696091 (-)
G627314 NA other upstream 1759189 56834350 ~ 56835092 (-)
G627323 NA other upstream 1771566 56846962 ~ 56852301 (-)

Expression


Co-expression Network