XLOC_025528 (timm29)


Basic Information

Item Value
gene id XLOC_025528
gene name timm29
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34180835 ~ 34182587 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050322
GTGTACTCGCCATTTTGGCTCAACAGTTTCACCATGCAGCACTATTACGTTTATCAAGATTTGGAAACTCTCGGCTGAAACCTCTTCCTGTGCACATTCACCGTGAACTCTGAACTTTCACACTTACTCGAGTTCATTTGCTAACATGGCCGCCTCGTGGCTGCTGAAGAGATGGTGCTCCACGGCAGCTAACGTTACAGTGACAGCCAAGGGCACACGGTGGGAAAGGCTAAGAAACGGTCGCGCAGGTGTATGGTTCCGCAGtcttttaactgactataaggaGGCTTGTCGTGAGGCGGTGGTAGGGGCCCGTGATCGACCCCTCAAAGCTTCAGTCTACCTGGGTGTTCTGGGAGGAATGTACGCTTGCTGTTACACCAACCCTGATGATTCCTCCTTTGAGACCAGCCTGCTGGAAACCTCCAACCGCCTAGCTCTCCTGTCGCCATGGATACGCAGTGGCACCTCAGATGGACACATCCAGACCCTTGTGAAGCTGCGAAACGAGGGCAGGCTGCGCTATGCCAGTCTGGGCATCGCCTCTTTGACTTATTACGCAGACTACGATGCTGAGTCTAGCCTGTATGAAGCGCGATGCTCTGCCATCTCTGTGCCCTGGTCCGAGCTGCATAAGCGTGTGCTGGACGTGGGCTTTGCGGGACGCTGGTGGGTGCTTGATCATAAAATGAAGGACTTTGATATAAACGAGGAGGAGTTCAAACATCTTCCTCCCGCTCTGGTGGCAACAGTCCCACCATCACCACAAATAACTGAAAGAAACGAAAAGCTGCATGAGGACTCATGGAAAGCTGTTGTGATGGATGAGGAGAGCAGTGAGTTAGAGGGTGTACAGAAAGACATGGACACAGCTgataaaggaaaagaaagcatCAAAGCATAAATGTATTGATGGACGTGGTAAAATTAATGCTGTTTTTCATACAAGAAGGATCAACTGTTAACAAGGAATGTAGTAGGAGACATTCTTGTACTACTAAAGACGAGGAATGATGATTAGAATGTGTTTATGCAAGTAAAGAAACATTTTACCACTAAAGATATGCAGAAAAGTGTGACTTGCTGCCTACAAGTACATTAAAACAGCTGCAGTATATGC

Function

symbol description
timm29 Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to be part of TIM22 mitochondrial import inner membrane insertion complex. Orthologous to human TIMM29 (translocase of inner mitochondrial membrane 29).

GO:

id name namespace
GO:0045039 protein insertion into mitochondrial inner membrane biological_process
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-380 Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to be part of TIM22 mitochondrial import inner membrane insertion complex. Orthologous to human TIMM29 (translocase of inner mitochondrial membrane 29).

Ensembl:

ensembl_id ENSDARG00000037909

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050322 True 1120 mRNA 0.48 2 34180835 34182587

Neighbor

gene id symbol gene type direction distance location
XLOC_025526 carm1 coding upstream 8621 34149337 ~ 34172214 (+)
XLOC_025527 BX649502.1 coding upstream 21763 34158875 ~ 34159072 (+)
XLOC_025525 NA coding upstream 33741 34140363 ~ 34147094 (+)
XLOC_025524 aldh3b1 coding upstream 51883 34120191 ~ 34128952 (+)
XLOC_025522 NA coding upstream 67134 34107202 ~ 34113701 (+)
XLOC_025529 dre-mir-181c coding downstream 15107 34197694 ~ 34197771 (+)
XLOC_025530 NA coding downstream 28306 34210893 ~ 34217224 (+)
XLOC_025531 slc25a23b coding downstream 37607 34220194 ~ 34230565 (+)
XLOC_025532 znf207a coding downstream 51442 34234029 ~ 34245025 (+)
XLOC_025533 NA coding downstream 66595 34249182 ~ 34250243 (+)
XLOC_025429 BX649540.1 misc upstream 3931799 30248739 ~ 30249036 (+)
XLOC_025521 BX649502.3 non-coding upstream 101665 34078200 ~ 34079170 (+)
XLOC_025517 NA non-coding upstream 607319 33560092 ~ 33573516 (+)
XLOC_025534 NA non-coding downstream 70970 34253557 ~ 34253946 (+)
XLOC_025535 BX470190.1 non-coding downstream 176628 34359215 ~ 34359332 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000069_05033299_05034403 NA coding CI01000069 null 5033299 ~ 5034605 (+)