XLOC_025531 (slc25a23b)


Basic Information

Item Value
gene id XLOC_025531
gene name slc25a23b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34220194 ~ 34230565 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050324
ATGGGCGAGGAGGGAACGCGCTTCCCTTCGTGTTGGACATGGGCTCGCTGTCAAGATAACGGCGTGTCGGATCCAGAACGGGAGAAACGATGGGCCGAGCTGTTTGACCAGTTGGACCTTAATAAAGACGGGAGGATCGATTTGAATGAGCTGCGCACCGGATTAACCGCATGGGGGATCGTTCGCGGTGAAGTGGACGAGATTGTACGTGTGAGCGACACCAATCATGACGGCCAGCTGGACTTTAAGGAATTTACTCAGTATCTACGCACACACGAGAAAGAGCTCCGACTCATGTTCAGCAGCCTGGACCACAACAACGATGGTCACATAGACGTTCCAGAGATTCAGCTCTCCTTGCGCAGCCTTGGAGTGAATGTATCCACAGAGCAGGCCTCCAGAATCCTGCAAAGCATAGACAGAGATGGCACTATGACCATTGACTGGAATGAGTGGCGGGACCACTTTCTGTTTAACCCCTTGCACAACATGGAGGACATCGCCCACTACTGGAAACACTCTCTGATGTTGGACATTGGAGAGCAGCTGACTGTGCCGGATGAGTTTTCAGAAAAGGAGCGTCGGTCTGGTGTTGTGTGGAGACAGCTGGTGGCCGGAGCAATGGCAGGAGCCGTGTCGCGAACAGGAACTGCCCCTTTGGACCGTCTGAAAGTTTTCCTACAGGTTCATGGCACCAGTGGTGTGACTTTGTTTAGTGGATTGCAAGGTATGGTGCGGGAGGGAGGATTGAGGTCCCTTTGGAGAGGCAACGGAATTAATGTCCTCAAAATTGCCCCGGAGTCAGCTATCAAATTCATGGCTTATGAACAGATCAAATGGCTGATCAGAGGCCGTAGGGAGGGAGGTACTCTGAGGGTTCAAGAACGCTTCATTGCTGGCTCTCTGGCTGGAGCTACAGCTCAGACCATCATCTACCCCATGGAGGTGTTGAAGACCCGTTTGACCCTTCGGAAGACTGGACAGTATTCTGGCATGGCAGACTGTGCCAAGCAGATACTGCGTAAAGAAGGAGTGCGTGCGTTCTATAAGGGCTATGTGCCCAACACACTTGGCATCATCCCTTATGCTGGCATTGATCTGGCTGTCTATGAGACACTGAAGAACGCTTGGCTCCAGCGGTACTGTATGGGCTCGGCTGATCCAGGAGTTCTGGTGCTGCTGGCATGTGGCACTGTGTCCAGCACATGTGGACAGCTGGCTAGTTACCCACTCGCTTTAATCCGAACCCGCATGCAGGCTCAGGCCTCAGCAGAAGGCGCTCCTCAGCTGTCGATGGTTGGTCAGTTCAAGCACATTGTGTCCCATGAGGGCGTTCCAGGACTGTACCGTGGCATCGCCCCCAATTTCCTCAAAGTCATTCCTGCTGTGAGCATCTCTTATGTGGTTTATGAGCATATGAAGAAAGCACTGGGAGTGGGATCTTAA

Function

symbol description
slc25a23b Predicted to enable ATP transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to several human genes including SLC25A23 (solute carrier family 25 member 23).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005347 ATP transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-220 Predicted to enable ATP transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Orthologous to several human genes including SLC25A23 (solute carrier family 25 member 23).

Ensembl:

ensembl_id ENSDARG00000024708

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050324 True 1446 mRNA 0.53 10 34220194 34230565

Neighbor

gene id symbol gene type direction distance location
XLOC_025530 NA coding upstream 2970 34210893 ~ 34217224 (+)
XLOC_025529 dre-mir-181c coding upstream 22423 34197694 ~ 34197771 (+)
XLOC_025528 timm29 coding upstream 37607 34180835 ~ 34182587 (+)
XLOC_025526 carm1 coding upstream 47980 34149337 ~ 34172214 (+)
XLOC_025527 BX649502.1 coding upstream 61122 34158875 ~ 34159072 (+)
XLOC_025532 znf207a coding downstream 3464 34234029 ~ 34245025 (+)
XLOC_025533 NA coding downstream 18617 34249182 ~ 34250243 (+)
XLOC_025534 NA coding downstream 22992 34253557 ~ 34253946 (+)
XLOC_025535 BX470190.1 coding downstream 128650 34359215 ~ 34359332 (+)
XLOC_025536 dlx4a coding downstream 439511 34670076 ~ 34681421 (+)
XLOC_025429 BX649540.1 misc upstream 3971158 30248739 ~ 30249036 (+)
XLOC_025525 NA non-coding upstream 73100 34140363 ~ 34147094 (+)
XLOC_025522 NA non-coding upstream 106493 34107202 ~ 34113701 (+)
XLOC_025538 NA non-coding downstream 502304 34732869 ~ 34733118 (+)
XLOC_025541 BX890565.1 non-coding downstream 679715 34910280 ~ 34910399 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000069_05064327_05071992 SLC25A23B coding CI01000069 null 5064116 ~ 5072032 (+)