XLOC_025541 (BX890565.1)


Basic Information

Item Value
gene id XLOC_025541
gene name BX890565.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34910280 ~ 34910399 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050332
TCTAGCTTCTAGCTCTCTGCAATTCttacatggttgcccactgaagctacgctaagcagggctgcgcctggtcagtacctggatgggagaccacatgggaaagctaagttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100888

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050332 True 120 rRNA 0.53 1 34910280 34910399

Neighbor

gene id symbol gene type direction distance location
XLOC_025539 cdk5r1a coding upstream 87960 34821327 ~ 34822320 (+)
XLOC_025538 NA coding upstream 177162 34732869 ~ 34733118 (+)
XLOC_025537 dusp3b coding upstream 222003 34683096 ~ 34688277 (+)
XLOC_025536 dlx4a coding upstream 228859 34670076 ~ 34681421 (+)
XLOC_025535 BX470190.1 coding upstream 550948 34359215 ~ 34359332 (+)
XLOC_025542 ca10b coding downstream 9411 34919810 ~ 34981673 (+)
XLOC_025543 smarce1 coding downstream 75496 34985895 ~ 34995062 (+)
XLOC_025544 prkcbb coding downstream 94663 35005062 ~ 35266060 (+)
XLOC_025545 cacng3b coding downstream 387679 35298078 ~ 35375978 (+)
XLOC_025546 rbbp6 coding downstream 495996 35406395 ~ 35421194 (+)
XLOC_025429 BX649540.1 misc upstream 4661244 30248739 ~ 30249036 (+)
XLOC_025534 NA non-coding upstream 656334 34253557 ~ 34253946 (+)
XLOC_025533 NA non-coding upstream 660037 34249182 ~ 34250243 (+)
XLOC_025530 NA non-coding upstream 693056 34210893 ~ 34217224 (+)
XLOC_025547 NA non-coding downstream 529511 35439910 ~ 35489947 (+)
XLOC_025550 NA non-coding downstream 657103 35567502 ~ 35570748 (+)
XLOC_025552 BX572621.1 non-coding downstream 832785 35743184 ~ 35743256 (+)
XLOC_025553 NA non-coding downstream 839442 35749841 ~ 35750233 (+)
XLOC_025555 NA non-coding downstream 1048279 35958678 ~ 35965512 (+)

Expression


Co-expression Network