XLOC_025552 (BX572621.1)


Basic Information

Item Value
gene id XLOC_025552
gene name BX572621.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 35743184 ~ 35743256 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050355
gtaaccattgacctccatagtatttgttattcctactatggaagtaaatggttacaggtttccaacattcttc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108644

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050355 True 73 miRNA 0.36 1 35743184 35743256

Neighbor

gene id symbol gene type direction distance location
XLOC_025551 traf7 coding upstream 108457 35608385 ~ 35634727 (+)
XLOC_025550 NA coding upstream 172436 35567502 ~ 35570748 (+)
XLOC_025549 rpusd1 coding upstream 193706 35542067 ~ 35549478 (+)
XLOC_025548 tnrc6a coding upstream 209818 35495570 ~ 35533366 (+)
XLOC_025547 NA coding upstream 253237 35439910 ~ 35489947 (+)
XLOC_025553 NA coding downstream 6585 35749841 ~ 35750233 (+)
XLOC_025554 crlf3 coding downstream 68784 35812040 ~ 35847114 (+)
XLOC_025555 NA coding downstream 215422 35958678 ~ 35965512 (+)
XLOC_025556 dre-mir-193a-1 coding downstream 216656 35959912 ~ 35960010 (+)
XLOC_025557 dre-mir-365-2 coding downstream 217733 35960989 ~ 35961086 (+)
XLOC_025429 BX649540.1 misc upstream 5494148 30248739 ~ 30249036 (+)
XLOC_025541 BX890565.1 non-coding upstream 832785 34910280 ~ 34910399 (+)
XLOC_025538 NA non-coding upstream 1010066 34732869 ~ 34733118 (+)
XLOC_025535 BX470190.1 non-coding upstream 1383852 34359215 ~ 34359332 (+)
XLOC_025558 NA non-coding downstream 274567 36017823 ~ 36023532 (+)

Expression


Co-expression Network