XLOC_025708 (zgc:123284)


Basic Information

Item Value
gene id XLOC_025708
gene name zgc:123284
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49097775 ~ 49100456 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050572
AGTAAAGCCAGACTTATAACCTTTGAACATGGCAGCATTAGAAGCATGTACTGCTCTTGTAACAGGGGCCAACCGAGGCTTGGGTTTAGAAATGGTCAAGCAACTCCTGGAGGCCGATTGCTCAAAAATATTTGCTGCATGTCGTGACACTGATGGACCAAATTCTGAGGTACTGCGAGAACTAGCTAAAAAGAATCCAGATGTTGTCACCCTTGTAAAGCTTGatgTTGCTGATCCAGCCAGTATCAAAGAATCTGCCAAGAAAGTGGGTTCACTACTGGGGGAGAAGGGTTTGAACCTACTTGTGAATAATGCTGCAATCTTGCCACAAAAAACCATGCTGACTTGTTCTGTTGAGGACATGCACAACACCTTCAACACCAATGTGATAGGACCTTTATTTGTCATTAGGGAGTACCTGCCGTATCTGCGAGCAGCAGTTAAAGCCAGTGGAAAACCAGGGATGTCACCTGGTAAAGCAGCTGTGATAAACATCTCCACGGATGCAGCATCTTTAAACATGATCCCATCAATGAAAGAGCCATTCCCACTGTTCCCATACAGTATCAGCAAGGTGGCTCTTAACATGCTGACTGTATACACTGCTAGAGATTTAAAGGCAGATGAGATCCTCTGCATTTCTATTCACCCAGGATGGGTGAGAACAGACATGGGAAGCTATGAGGCAACACTCGACACCAGAGAAAGTGTGGAAGGCATGCTGCGTGTCATTGGCAGCCTAACTGAGAAAGATCAAGGTGGATACATGGACTACACTGGAAAAACAATGCCCTGGTAAACCAGAAGAACAATCGGAAACATTCTTACATAAGGAGGTTCATCAAGAGGCCAATTGTGACGCAAACTTTACCTGTAATAAATACGCTAATATGACCAGTCATAACCGATAACCTCAGTCTcatgatatataaaataaagcaaacaaaccaaAAAGGAACCAGCTTCTTGAGCAAAATAATTTGTCATTCTCACAGCAAAACACACCATGACATTTcaaatatttagcatttattGATTTATGCAATTTCTTACAACATTACTTCAACATGGACTCAAGCAAACAACAAGAGATGgattttatatatacacagtcgcttattttttacattttgatcaATGCTTATGTTAGTATATAACTTGGTATATATATGAATTGTATGTATACATTgtgaaaaatgaaataaatatcaataatcttt

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-051113-92 No description available

Ensembl:

ensembl_id ENSDARG00000102720

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050572 True 1220 mRNA 0.40 6 49097775 49100456

Neighbor

gene id symbol gene type direction distance location
XLOC_025707 zgc:112146 coding upstream 18457 49074008 ~ 49079318 (+)
XLOC_025706 zgc:92161 coding upstream 39449 49043917 ~ 49058326 (+)
XLOC_025705 zgc:163083 coding upstream 73205 49021079 ~ 49024570 (+)
XLOC_025704 NA coding upstream 91110 48998891 ~ 49006665 (+)
XLOC_025703 NA coding upstream 189945 48894467 ~ 48907830 (+)
XLOC_025709 BX649515.1 coding downstream 31885 49132341 ~ 49132477 (+)
XLOC_025710 NA coding downstream 33926 49134382 ~ 49134743 (+)
XLOC_025711 tecra coding downstream 296659 49397115 ~ 49421274 (+)
XLOC_025712 NA coding downstream 355306 49455762 ~ 49459924 (+)
XLOC_025713 NA coding downstream 390098 49490554 ~ 49506172 (+)
XLOC_025429 BX649540.1 misc upstream 18848739 30248739 ~ 30249036 (+)
XLOC_025701 NA non-coding upstream 468004 48618161 ~ 48629771 (+)
XLOC_025698 NA non-coding upstream 630218 48464839 ~ 48467557 (+)
XLOC_025697 NA non-coding upstream 654879 48439066 ~ 48442896 (+)
XLOC_025715 NA non-coding downstream 464801 49565257 ~ 49624678 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01007391_00002791_00003615 NA coding CI01007391 null 2751 ~ 3615 (+)