XLOC_025737 (BX511132.1)


Basic Information

Item Value
gene id XLOC_025737
gene name BX511132.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52367302 ~ 52379472 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050604
TTATTTTTCTTCATCTGCAGGTCTGCTTCACTAAGCATGAGGCGCGTGTATCTGCTGAGCCTGGGTCTTCTGTTTGTAGTAATTGAAGAAATCATCATGCAAGACTGCTTAGCTggttataataaacaaaaaggaaAGTGTGTAGAAATAGATGAGTGTGAGCGGGAACTCCTCGTTtgtggagaaaatgcaaactgcTTCAACACTGCAGGCAGCTACTACTGTCAGTGTCATGGAGGGTTCAGAGCTGAGGGTAACAAACCACCTTTTAATTTCACACAAGCAGATGGGATTCAGTGCAAAGACATTGATGAATGTGTGGGTGGCAGCAATATTTGTGGTCCAAATGCAGAATGCATCAATAATGAAGGAGATTTTGCCTGCAAGTGTAGATCTGGCTTCACTGCCAACAATGGAATGCTGATTTTTGTTGTGAGACAAGGAGTTCAGTGTGTTGACATCAATGATTGTGTGGATGGAAATATTGATTGTGGCTCTGATGCAATATGTGTGAATACTGAAGGAGGTTATTATTGCACATGTGAATCTGGCTTCATTTCCAGCAGTGGaaacaggacatttttagcaGGACTAGATATTCAGTGTGTTGGTAAGTAAGAAAGTTTTGCTTAATGACTTTACATTCAACCATGAATTAAACCATGACCATTTTTAACTATGAGCAGTTGCTGGACACTAAATAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097960

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050604 True 704 lncRNA 0.40 5 52367302 52379472

Neighbor

gene id symbol gene type direction distance location
XLOC_025736 BX511132.2 coding upstream 72794 52275691 ~ 52294508 (+)
XLOC_025735 NA coding upstream 103156 52224103 ~ 52264146 (+)
XLOC_025734 adgre14 coding upstream 200456 52145511 ~ 52166846 (+)
XLOC_025733 FUT9 coding upstream 256493 52092599 ~ 52110809 (+)
XLOC_025732 FUT9 coding upstream 277502 52078798 ~ 52089800 (+)
XLOC_025739 NA coding downstream 10780 52390252 ~ 52392205 (+)
XLOC_025740 si:ch211-191c10.1 coding downstream 62630 52442102 ~ 52465596 (+)
XLOC_025741 adgre5a coding downstream 88407 52467879 ~ 52471761 (+)
XLOC_025742 si:ch211-191c10.3 coding downstream 94198 52473670 ~ 52474770 (+)
XLOC_025743 si:ch211-241f5.3 coding downstream 95586 52475058 ~ 52496765 (+)
XLOC_025429 BX649540.1 misc upstream 22118266 30248739 ~ 30249036 (+)
XLOC_025731 NA non-coding upstream 466403 51895324 ~ 51900899 (+)
XLOC_025730 NA non-coding upstream 608591 51758345 ~ 51758711 (+)
XLOC_025726 NA non-coding upstream 920306 51417422 ~ 51446996 (+)
XLOC_025725 NA non-coding upstream 1344245 51011289 ~ 51023057 (+)
XLOC_025746 BX511096.1 non-coding downstream 240586 52620058 ~ 52620175 (+)
XLOC_025750 NA non-coding downstream 426800 52806272 ~ 52883424 (+)
XLOC_025751 CT573476.2 non-coding downstream 449440 52828912 ~ 52829006 (+)
XLOC_025761 NA non-coding downstream 1147493 53526965 ~ 53652401 (+)

Expression


Co-expression Network