XLOC_025732 (FUT9)


Basic Information

Item Value
gene id XLOC_025732
gene name FUT9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 52078798 ~ 52089800 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050599
CTTTTGTTCCTCATTGTTTCAATAATCTTTACTGGACTGAGTTATATTCCAACCACGACCATGTCAAGTCAGAAAACTATATTTTATCCTGTATATTTTGTTCTTATTATCTCTGTTGGTTTCaacatatttttagtatattCTGGATACCTGACCCTTGATTATAACACATTGGCATATATCACGACTTGTACAACTTTGAAAGAGAAGCCTCTGGAAAACAGCACTATCCTGCTCATATGGTTTTGGCCATCTGGAAGACAATTAGGTCTAAATTCTTGCAGTGCAAAATTTAATATTGATGGCTGTCACTTGACTCTAGATCGAGAGCTTTACGATGATGCTCATGGAGTACTGATAAATCacagaaacattaaaaatgaccTGTCAAATTTACCCACAAAGCCACGACCCTTCTTCCAGAAATGGATATGGATGCACTTTGAGTCCCCAGAAAACACAAGACGACTCGACGGTCTGGATAACCTTTTTAATGTGACGCTGAATTACAGACGGGATGCTGATATTGGGCTTCGTGAACAATTTATTCTTAAAAATGAAGACACTGAGGATAAGATTTTCCCACAAGTTCTGGACAAGAAAGACAAATTAGTTTGCTGGATAGTGAGCCACTGGAATGAGAAGCTTGAACGAGTAGCTTATTTTAATGAGCTAAAAAAACACATTGACATTTATGCCCTTGGGAGACATTTTGGGAGCAAAGTAAATAATACACAATACAAGGAAACCCTAACTAGATGCA

Function

symbol description
fut9 Enables 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity. Involved in several processes, including fucosylation; positive regulation of neuron projection development; and regulation of leukocyte tethering or rolling. Located in trans-Golgi network membrane.

GO: NA

KEGG:

id description
ko00515 Mannose type O-glycan biosynthesis
ko00601 Glycosphingolipid biosynthesis - lacto and neolacto series
ko00603 Glycosphingolipid biosynthesis - globo and isoglobo series
ko01003 Glycosyltransferases

Ensembl:

ensembl_id ENSDARG00000070979

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050599 True 763 mRNA 0.37 2 52078798 52089800

Neighbor

gene id symbol gene type direction distance location
XLOC_025729 baiap2a coding upstream 130772 51684963 ~ 51948026 (+)
XLOC_025731 NA coding upstream 177899 51895324 ~ 51900899 (+)
XLOC_025730 NA coding upstream 320087 51758345 ~ 51758711 (+)
XLOC_025728 chmp6a coding upstream 401216 51660158 ~ 51677582 (+)
XLOC_025727 ttyh2l coding upstream 421076 51563695 ~ 51657722 (+)
XLOC_025733 FUT9 coding downstream 2799 52092599 ~ 52110809 (+)
XLOC_025734 adgre14 coding downstream 55711 52145511 ~ 52166846 (+)
XLOC_025735 NA coding downstream 134303 52224103 ~ 52264146 (+)
XLOC_025736 BX511132.2 coding downstream 185891 52275691 ~ 52294508 (+)
XLOC_025737 BX511132.1 coding downstream 277502 52367302 ~ 52379472 (+)
XLOC_025429 BX649540.1 misc upstream 21829762 30248739 ~ 30249036 (+)
XLOC_025726 NA non-coding upstream 631802 51417422 ~ 51446996 (+)
XLOC_025725 NA non-coding upstream 1055741 51011289 ~ 51023057 (+)
XLOC_025724 NA non-coding upstream 1269605 50808637 ~ 50809193 (+)
XLOC_025738 NA non-coding downstream 287778 52377578 ~ 52389039 (+)
XLOC_025739 NA non-coding downstream 300452 52390252 ~ 52392205 (+)
XLOC_025746 BX511096.1 non-coding downstream 530258 52620058 ~ 52620175 (+)

Expression


Co-expression Network