LOC110529218


Basic Information

Item Value
gene id LOC110529218
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 25796900 ~ 25800394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110529218
ATGTGTGCGACGGACAAACTTGCAATGGTCGTGGTAGTTGGCCTTGCGGGGGATATTGTACTCTACACGCTGTGCAAGCTCCCTGCGGCATCTGTTGCTTGCGCTAAGGTACCATACATAGTCCTGCTGATGATAGCCGTGCACGTGCTGTGCTATCTGGGGCTGAACTACCAGACCCTGGTTCCTTTCACTGACCCTGGTCCATCTCCTGCTGCTCACAGCCCTGtcctgtgggaaccacacactgGTGCTGGGGGTCATCATCGCACAGAGGCACCAGGACAGCCTGCAGGGAACCGTGCTGCTCAGACAGCTCCTGGTTAACTGGGTGTTGTACCTGTGTGCAGTCACCCAACACCACCAGTTGTGTATCAAGATCCTGGGAGACTGTTACTACTGTATCTGTGGCCTGCCTGGTTACCGTGACGACCACGCCGTTTGCGCCATCATAATGGGCCTGGCCATGGTGGAGGCCGTCTCaggaggagaaggggaaagagTGGATAGAATAGGGAGTTGCTCCGAGAACCCCAAACACCACAGCTACATGGCGGTGCTGTCACTCGTGGCGACCACCATATACTGGTGCGGGGTCAGCCAGCTGGTCAAGCTGGGGCTCATGCTGCTGGTCGTTGTGACAACGGGTGTCGTCAACATCTACAGCTGGAGGGACATCTACGAACTATATGACTTCATACGATTTACCAGCTACAGgacaTCTGTAGTCCCTTCCAAGTACCTGATGACAGTGATAGTCATTATCATGAGGATAAGCTTCTACTACTTTCCCAGACATGTGGAGAGGCAGTCAAATAAGCTGTTCCTGTGAAAGATTGAGGTGCATGACTAGAAGGTTAGGGTGTTTGAGATAAAGCACTGGTCACCAACATGCTGcctgaactag

Function

NR:

description
PREDICTED: adenylate cyclase type 3-like isoform X1

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0016849 phosphorus-oxygen lyase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110529218 True 904 mRNA 0.53 6 25796900 25800394

Neighbor

gene id symbol gene type direction distance location
LOC110529693 LOC106571480 coding downstream 21872 25758877 ~ 25775028 (-)
LOC110529692 LOC106607895 coding downstream 38550 25744024 ~ 25758350 (-)
LOC110529682 LOC106571470 coding downstream 293465 25497573 ~ 25503435 (-)
LOC110529680 disp1 coding downstream 306626 25416277 ~ 25490274 (-)
LOC110529676 LOC106571466 coding downstream 470602 25323627 ~ 25326298 (-)
LOC110529694 LOC106571481 coding upstream 926 25801320 ~ 25805570 (-)
LOC110529696 LOC106571482 coding upstream 54186 25854580 ~ 25873677 (-)
LOC110529697 NA coding upstream 192030 25992424 ~ 25998685 (-)
LOC110529219 NA coding upstream 206488 26006882 ~ 26017782 (-)
LOC110529220 LOC106571486 coding upstream 287052 26087446 ~ 26094609 (-)
G689883 NA non-coding downstream 17538 25779126 ~ 25779362 (-)
G689874 NA non-coding downstream 59199 25737493 ~ 25737701 (-)
G689873 NA non-coding downstream 59478 25737222 ~ 25737422 (-)
G689870 NA non-coding downstream 60970 25735460 ~ 25735930 (-)
G689869 NA non-coding downstream 61579 25734996 ~ 25735321 (-)
G689895 NA non-coding upstream 10661 25811055 ~ 25811397 (-)
G689966 NA non-coding upstream 107598 25907992 ~ 25908308 (-)
G689981 NA non-coding upstream 120430 25920824 ~ 25921483 (-)
G690009 NA non-coding upstream 143342 25943736 ~ 25943945 (-)
G690021 NA non-coding upstream 155369 25955763 ~ 25956270 (-)
G689810 LOC106571475 other downstream 132235 25664165 ~ 25664665 (-)
G689723 rad51 other downstream 275612 25517566 ~ 25521288 (-)
G689685 NA other downstream 385768 25410823 ~ 25411132 (-)
G689656 tlr5m other downstream 389553 25376122 ~ 25407347 (-)
LOC110529665 LOC106571552 other downstream 799065 24992535 ~ 25010299 (-)
G690033 NA other upstream 164785 25965179 ~ 25965493 (-)
G690073 NA other upstream 190284 25990678 ~ 25991143 (-)
cenpw LOC106571497 other upstream 628721 26428702 ~ 26430888 (-)
G691447 LOC106571509 other upstream 1063816 26864210 ~ 26868078 (-)

Expression


Co-expression Network