LOC110530618 (slc7a8)


Basic Information

Item Value
gene id LOC110530618
gene name slc7a8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75049324 ~ 75068682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613831.2
AGCATTTCAAGCAAATTGTGTTAAATTTTCTGGTAAGGCGGAGATCTTGTTCACTTGCTAATGTGGAACAGCTGTCGAGTGTGCTGATAACAGGATGCTGGTGATTCGTCATTTTAAAAGTCACGGCTACTCCGAAGAAGAGGTAACACCAAACTGAGCTAGGTTGCACCGCACCTGCGCTTTTCATCCAACAAAAGTAATCTTGGAGCCGAGATGACCGATGGTCCTAGGCTGCGGGGCAATGCATCGGCAGATGGGGATACGCTTTCCTCCGAATCCACTGAAGAGGGCTCCGGAAGAGTGGCCCTGAAGAAGGAGATTGGCCTTGTCAGCGCATGTGGAATTATTGTGGGTAACATCATCGGTTCAGGGATCTTTGTGAGCCCAAAGGGCGTTCTGGAGAATGCGAGCTCTGTGGGGCTGGCTCTCATCGTGTGGATTGTCACTGGAGTGATCACAGCCATTGGCGCACTCTGCTATGCCGAGCTGGGCGTTACCATCCCCAAGTCTGGAGGAGACTACTCATACGTCAAGGACATATTTGGAGGACTTGCCGGGTTCCTGCGTCTGTGGATCGCGGTATTGGTGATCTACCCCACCAACCAAGCGGTCATCGCCCTCACCTTCTCCAACTACGTCCTGCAGCCCCTATTTCCCTCCTGCTTCCCCCCAGAGAATGGCCTCCGCCTGCTGGCTGCTGTCTGTCTATTGTTGCTGACGTGGGTGAACTGCTCCAGTGTGCGCTGGGCCACTCGTGTTCAGGATGTCTTCACTACTGGGAAGCTGCTAGCCCTGGGTCTTATCATCATCATGGGCTTTGTGCAGATCTGCAAAGGGGAGTATTACTGGCTGGAGCCTGCGCATGCATTTGAGACGTTCCAGCCCTATGACATTGGCCAGATAGCCCTGTCCTTCCTGCAAGGCTCCTTTGCCTACGGGGGATGGAACTTCCTCAACTATGTCACAGAGGAGCTTGTCGACCCCTACAAGAACCTTCCTCGGGCCAtcttcatctccatccctctgGTGACTTTTGTTTATGTGTTCGCCAACATCGCCTATGTCACCGCCATGAGTCCTCAGGAGCTGCTGGCCTCCAATGCCGTCGCTGTGACATTTGGTGAGAAGTTACTTGGAGTGATGTCATGGATCATGCCCATCTCTGTCGCGCTGTCTACTTTTGGGGGGGTCAATGGCTCCCTCTTCACTTCGTCGAGGCTGTTTTTTGCTGGTGCAAGGGAAGGCCATCTCCCCCGGCTACTGGCAATGATTCATGTGAAACGCTGTACCCCAATCCCAGCCCTACTATTCACTTGTATATCCACCCTACTGATGCTGTGCACCAGTGACATGTATACCCTCATCAACTATGTGGGCTTCATAAACTACCTCTTCTATGGGGTCACCGTCGCTGGGCAGATTGTGCTGCGCATCAAACAGCCAGACCTATATCGGCCTATCAAGGTGAGCCTGGTGTGGCCAGTGATCTACCTGTTGTTCTGGGCCTTCCTGCTCCTCTTCTCGCTGTACTCTGAGCCTGTGGTGTGTGGCCTCGGCATGGCTATCATGCTGACTGGAGTCCCTGTCTACTTCCTGGGGGTCTTCTGGGACAACAAGCCACAATGCTTCAACACCTTCATCGGTAAGATGACCCATGTGTGCCAAAAGTTCTGTGTGGTGGTGTACCCAGACATGGGCGACAGCAGAAATGTAGGAAACCAGGGAACGGAATAGGGACAGAAAGATCTAGGAGATGTGTTCAACCCATCTGAATGGACATTGGCACAGACAGTCACTCTTAAAAGGGTGTTGATATTGACTGGGAGACATCAAAAGATGGACGGATGCACTCAAGGAGATATGCTACAGCACTTGGTTTTCTCTTGTAAATGTTGACTGGCCTTAAGACTTTACACATCTGCCTCAATGCAATACTACTGCCCATTCCCATGAGTCTGAGCTGCAATATCAATATATTGGACAGATAAGTAATGTTGATGTTCAGATGTAAAGAGAATTTTCTGTAGGATCTGTTTTGGGAAATGTTGTACTGTATTGTCTTTTTATTTAGATTTTGGTATCGGTTTAATTTCTGTTTTGGTTGTGGCAAAGTTGAATAGTGATCTTTAATATAGTCTTCCACATAGCACTAAACAAACTGTCATTCCCTAAATGTTTGTTTACTGCATTTCATTTATCACTCCTTCGTTGTTTTGTTATTGTTGTACATGAGTGTAATGTCTGCTGTAGACTGCTCTTCAATGAACTAGAGGGTAGGTGTACTCCTGAACGATTAGATCCTTTTACGTGATAGTCACGTTATACCACTCACAACTTGATATGTTGATCTTCAAGATTAGATTTTTATTTCTTGCAAAATAACTAGCATGACCCATACACTGAATGTAATAATTATGTAAACAAATGATTAATAATCATAGAAATGCTGCATAGAAAATATATACTTTACATTAAGTTTTGCTCAAAGGTGCAAACCTCGTCTGTGTATGATTGTCAATAATAATGCAACGTATTCCCTTAATGCCAGTCACAGGTCTTTTTGTTTGGTGATACACATCTTGCATTGATTGAAATGTTTGATATTATTGTGCTGCTCAGCATGGAATCACTAATTCCTTACACTTTCAAGATTCATTACCATCTTATATTCTCTATCAATAGAAACACGCAATGAAACACAGTAACACTAGTCATTTGAATGATAAATTCCTCACTGAACTGCCACCATCTATCTTACATGCTTTGTTACCCTGTTTGTCAAGCAACAACAGGCAATGAAAATTAACAGGCATGCTCCTACTGTCTCCTTGTGGTGCTGGGAAGCCCAATGCTGGTGGTTTAGTTCCTTCCTGCCATTAAAATCCTCCCACAAACA

Function

symbol description
slc7a8 Enables several functions, including neutral amino acid transmembrane transporter activity; thyroid hormone transmembrane transporter activity; and toxin transmembrane transporter activity. Involved in L-alanine import across plasma membrane; L-leucine import across plasma membrane; and thyroid hormone transport. Located in plasma membrane. Part of basolateral plasma membrane and microvillus membrane.

NR:

description
large neutral amino acids transporter small subunit 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613831.2 True 2896 mRNA 0.46 12 75049324 75068682

Neighbor

gene id symbol gene type direction distance location
LOC110530615 LOC106569429 coding downstream 962 75034055 ~ 75048362 (-)
LOC110530613 LOC106569433 coding downstream 17607 75029049 ~ 75031717 (-)
LOC110530612 LOC106569433 coding downstream 26334 75020372 ~ 75022990 (-)
LOC118965556 LOC106569433 coding downstream 34847 75011860 ~ 75014477 (-)
LOC118965555 LOC106569433 coding downstream 43567 75003193 ~ 75005757 (-)
LOC110530616 LOC106569427 coding upstream 1961 75070643 ~ 75076074 (-)
LOC110530622 LOC106587759 coding upstream 383349 75452031 ~ 75457404 (-)
LOC118965557 NA coding upstream 430906 75499588 ~ 75503959 (-)
LOC118965558 NA coding upstream 464080 75527435 ~ 75535384 (-)
abhd4 LOC106569475 coding upstream 498187 75566869 ~ 75570627 (-)
G746724 NA non-coding downstream 82048 74966199 ~ 74967276 (-)
G746764 NA non-coding downstream 94433 74954627 ~ 74954891 (-)
G746763 NA non-coding downstream 95637 74953173 ~ 74953687 (-)
G746760 NA non-coding downstream 99458 74949429 ~ 74949866 (-)
G746779 LOC106569426 non-coding upstream 21003 75089685 ~ 75096648 (-)
G746823 NA non-coding upstream 71574 75140256 ~ 75140465 (-)
G746825 NA non-coding upstream 72159 75140841 ~ 75141086 (-)
G747217 NA non-coding upstream 183773 75252455 ~ 75252941 (-)
G747223 NA non-coding upstream 198382 75267064 ~ 75317869 (-)
G746730 NA other downstream 209234 74839731 ~ 74840090 (-)
G746434 NA other downstream 689350 74342629 ~ 74359974 (-)
LOC110530984 NA other downstream 1104894 73939248 ~ 73944430 (-)
G745292 c8 other downstream 1657891 73385652 ~ 73391433 (-)
G745300 NA other downstream 1667623 73381301 ~ 73381701 (-)
G747266 NA other upstream 294060 75362742 ~ 75363491 (-)
G747337 NA other upstream 396398 75465080 ~ 75465616 (-)
LOC110530627 LOC106600212 other upstream 509000 75576652 ~ 75578356 (-)
G747442 NA other upstream 575613 75644295 ~ 75723894 (-)

Expression


Co-expression Network