G746779 (LOC106569426)


Basic Information

Item Value
gene id G746779
gene name LOC106569426
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 75089685 ~ 75096648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU847760
aaaaaaaaacatctcagGATTTATTGAGAAAATATTTGCTTTCCCAGTTCTGGTTACAAGGTAGAGCTATAACAGTGTAAGAGAGAGACTACTCCATGACTGAGTGAGCCGTATATTGAGCCCAGCATATCAAACACCGTGTGGGGGAACTGCAGCCCATTGTTTGGGAAAAatgttcaaacatttaaattagcTAGGAACATATCTGAAAGTAAACCATAACGGACGTGTAAAATGAAATTAATCCAAAACGAAAGAAAATTATTGCGATATCCTTATCAACCATCCCTAATTCTTATAATTCTCAAAAACTCTTCGaccattcctccctctcctctctatttcttTGGTTCTTGGTACTGGTGGTGCAGCTTCAACACATCTTCCTGGGAGACTCTGGTCCAGCCCTCACTGTGGACGTGGTATAGGTTGACCTGTCCTCCGCTGTAGGCATCTCGGTATGTGGCCTGGTAGATAGCCCTGCGGCCCAGCTCACACGCCTCTTCCACAGATAGATCCTGTCTCAGCCCGCTGTCCACCACACCGTACGCATACATGGACCCAGAGCCCACTGCAAACAGGTCCCCGCACACACGGTTCCCCTCCGAGTCCACGTAGTACAACCCTGGCCCCCTCTTGTCCCAACCACACACCATGGTGCCCATGCTGAGGCCCATGCCTTTATACTGGTACACCATATTTGCCAGAAGCTTGGAGGCAGCTGCCACAGAGATGCGCTCCTTGTTGCGAAGCTCATAGACGCGGCACTGGCGGGCCAGTAGGCGCTCCCAGAAGCTGCAGTCTGCTGCACCTCCAGCCATGGTGCCCAGCAGGTACGGGTTAATCTCTATAACCTTCTTTACAGTCTGGGAGGCGATGTAGGCGCCAGCTGTGGCCCGAGAGTCCACCGCCACGATG

Function

NR:

description
proteasome subunit beta type-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU847760 True 918 lncRNA 0.51 2 75089685 75096648

Neighbor

gene id symbol gene type direction distance location
LOC110530616 LOC106569427 coding downstream 13611 75070643 ~ 75076074 (-)
LOC110530618 slc7a8 coding downstream 21003 75049324 ~ 75068682 (-)
LOC110530615 LOC106569429 coding downstream 41323 75034055 ~ 75048362 (-)
LOC110530613 LOC106569433 coding downstream 57968 75029049 ~ 75031717 (-)
LOC110530612 LOC106569433 coding downstream 66695 75020372 ~ 75022990 (-)
LOC110530622 LOC106587759 coding upstream 355383 75452031 ~ 75457404 (-)
LOC118965557 NA coding upstream 402940 75499588 ~ 75503959 (-)
LOC118965558 NA coding upstream 436114 75527435 ~ 75535384 (-)
abhd4 LOC106569475 coding upstream 470221 75566869 ~ 75570627 (-)
LOC110530627 LOC106600212 coding upstream 480004 75576652 ~ 75578356 (-)
G746724 NA non-coding downstream 122409 74966199 ~ 74967276 (-)
G746764 NA non-coding downstream 134794 74954627 ~ 74954891 (-)
G746763 NA non-coding downstream 135998 74953173 ~ 74953687 (-)
G746760 NA non-coding downstream 139819 74949429 ~ 74949866 (-)
G746823 NA non-coding upstream 43608 75140256 ~ 75140465 (-)
G746825 NA non-coding upstream 44193 75140841 ~ 75141086 (-)
G747217 NA non-coding upstream 155807 75252455 ~ 75252941 (-)
G747223 NA non-coding upstream 170416 75267064 ~ 75317869 (-)
G747251 NA non-coding upstream 237401 75334049 ~ 75334252 (-)
G746730 NA other downstream 249595 74839731 ~ 74840090 (-)
G746434 NA other downstream 729711 74342629 ~ 74359974 (-)
LOC110530984 NA other downstream 1145255 73939248 ~ 73944430 (-)
G745292 c8 other downstream 1698252 73385652 ~ 73391433 (-)
G745300 NA other downstream 1707984 73381301 ~ 73381701 (-)
G747266 NA other upstream 266094 75362742 ~ 75363491 (-)
G747337 NA other upstream 368432 75465080 ~ 75465616 (-)
G747442 NA other upstream 547647 75644295 ~ 75723894 (-)

Expression


Co-expression Network