G663485


Basic Information

Item Value
gene id G663485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 660922 ~ 661730 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755185
ctaggtcactTATTACTAAGGAActtccctcacctggttgtctaggtcactAATTagcaaggaactcccctcacctggttgtctaggtcactAATTactaaggaactcccctcacctggttgtctaggtcactAATTactaaggaactcccctcacctggttgtctaggtcactAATTAGCAAAGAACTCCCCTCACATGGTTGTCTAGGTCACTAATTactaaggaactcccctcacctggttgtctaggtcactAATTACTAAGGAacacccctcacctggttgtctaggtctttattgaaaggaaaacacaaaaaCCTGCCGACACtaagccctccatggaatgagtttgacacccctgtcaAGGTTATTGTTCTTCTTGGAATAGTCTAACACTGTGGTGGTCTAACTGTTCAATATAcctctcactgactgactgactgtctgactgtctgactgactgactgactgactgactgactgactgactgtctgactgactgacggctGGAGCAGTTTACCAAGCAGAGTGCTGTGTGAtccatctgactgactgactgactgtctgactgactgactgactgactgctggaGCAGTTTACCAAGCAGAGTGTGGTGTGAtccatctgactgactgactgactgactgtctgactgactgctgGAGCAGTTTACCAAGCAGAGTGTGGTGTGATCCATCTACATGGAGAGACATCTCCCACTTCCCTCTGTCTATAATGTGTGTTCATTAAATTCTTGTTCGCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU755185 True 768 lncRNA 0.47 2 660922 661730

Neighbor

gene id symbol gene type direction distance location
LOC118965589 NA coding downstream 388910 270675 ~ 272012 (-)
hmgn3 LOC106570980 coding downstream 409830 204110 ~ 251092 (-)
LOC110515871 phip coding downstream 464917 67258 ~ 196005 (-)
LOC118965475 LOC106570990 coding upstream 38293 700023 ~ 712275 (-)
LOC110513701 LOC106570988 coding upstream 58304 716794 ~ 833087 (-)
LOC118965602 NA coding upstream 499092 1160822 ~ 1162168 (-)
LOC118965476 ppp1r14c coding upstream 667943 1307226 ~ 1414828 (-)
LOC118965590 NA coding upstream 761757 1423487 ~ 1424991 (-)
G663466 NA non-coding downstream 42233 618397 ~ 618689 (-)
G663445 NA non-coding downstream 87782 572440 ~ 573140 (-)
G663438 NA non-coding downstream 113532 546884 ~ 547390 (-)
G663257 NA non-coding downstream 193656 466450 ~ 467266 (-)
G663254 NA non-coding downstream 194759 459398 ~ 466163 (-)
G663491 NA non-coding upstream 10594 672324 ~ 676101 (-)
G663497 NA non-coding upstream 27138 688868 ~ 689135 (-)
G663488 NA non-coding upstream 35262 696992 ~ 697606 (-)
G663504 NA non-coding upstream 54369 716099 ~ 716483 (-)
G663235 NA other downstream 230664 428191 ~ 430258 (-)
G663215 NA other downstream 273940 381322 ~ 388193 (-)
G664089 NA other upstream 776030 1437760 ~ 1438441 (-)
armc1l LOC106571055 other upstream 818445 1479450 ~ 1498700 (-)
G664733 NA other upstream 1332159 1993889 ~ 1994530 (-)
G664763 rab10 other upstream 1629672 2291402 ~ 2350981 (-)
G665603 NA other upstream 2575158 3236888 ~ 3240052 (-)

Expression


Co-expression Network