G663488


Basic Information

Item Value
gene id G663488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 696992 ~ 697606 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755192
TCATGTTCTACGACTGAGTGGAATTTATTTGACTGCATTACATTCCACTTCCTGCTGGCTCAAACTCAAATTCTACATCTTGTGGGGTGGGGCCAGTTGAGTTCAGTTTTGAATTTAAACTCATGAGATGAATAGGAGTCTATTCCAAAATTCTGAACCCTGGGGGGTGGTGTCTTACTTACAactgtccagacagacagacaatcccACACCATGGATCATTGAGCTTCTTCAACATGTAATCTGGCACATTTATGCCTTTCTACTAATTTCTAACTTGCCAGAGCCTTTCTTCACGGCAGCTTGGGGATTGTTGTGCTAATTGACTTGGACTTTAAAGGGTTTAGGGGCCAGTTCAGATCAGGTTGCCACCTGACTGAGAGACAGCAACAACAGCAGGGCTCAGCTCTGGCGTGGAGggtactgtctgttactgtctgttaatGTTACCGTCTGTtgatgttactgtctgttacaggcagtcactgttactgtctgttgtTGTCAGTGATTGTCATTTACTCTCCAATACTGACTGTTACAGTCCTTTAATGTCTGTTACTGCACACGATGACCAGCATCCCCATGCTACGTAAGGAAGGGGGGAGGCCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU755192 True 615 lncRNA 0.45 1 696992 697606

Neighbor

gene id symbol gene type direction distance location
LOC118965589 NA coding downstream 424980 270675 ~ 272012 (-)
hmgn3 LOC106570980 coding downstream 445900 204110 ~ 251092 (-)
LOC110515871 phip coding downstream 500987 67258 ~ 196005 (-)
LOC118965475 LOC106570990 coding upstream 2417 700023 ~ 712275 (-)
LOC110513701 LOC106570988 coding upstream 22428 716794 ~ 833087 (-)
LOC118965602 NA coding upstream 463216 1160822 ~ 1162168 (-)
LOC118965476 ppp1r14c coding upstream 632067 1307226 ~ 1414828 (-)
LOC118965590 NA coding upstream 725881 1423487 ~ 1424991 (-)
G663497 NA non-coding downstream 7857 688868 ~ 689135 (-)
G663491 NA non-coding downstream 20891 672324 ~ 676101 (-)
G663485 NA non-coding downstream 35262 660922 ~ 661730 (-)
G663466 NA non-coding downstream 78303 618397 ~ 618689 (-)
G663445 NA non-coding downstream 123852 572440 ~ 573140 (-)
G663504 NA non-coding upstream 18493 716099 ~ 716483 (-)
G663522 NA non-coding upstream 79933 777539 ~ 778747 (-)
G663558 NA non-coding upstream 153828 851434 ~ 855500 (-)
G663573 NA non-coding upstream 180989 878595 ~ 878833 (-)
G663235 NA other downstream 266734 428191 ~ 430258 (-)
G663215 NA other downstream 310010 381322 ~ 388193 (-)
G664089 NA other upstream 740154 1437760 ~ 1438441 (-)
armc1l LOC106571055 other upstream 782569 1479450 ~ 1498700 (-)
G664733 NA other upstream 1296283 1993889 ~ 1994530 (-)
G664763 rab10 other upstream 1593796 2291402 ~ 2350981 (-)
G665603 NA other upstream 2539282 3236888 ~ 3240052 (-)

Expression


Co-expression Network