G663522


Basic Information

Item Value
gene id G663522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 777539 ~ 778747 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU755252
gtggtagtgactggttatagttgtagtagtgactggttatagtagtggtagtggtagtgactggttatagttgtagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagttatagtagtgttagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagttatagtagtggttgtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagttatagtagtggtagtgtctggttatagttatagtagtggtagtgactggttattgtagtggtagtgactggttatagtagtggtagtgtctggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagttatagtagtggttgtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagttatagtagtagttgtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagttatagtagtggtagtgtctggttatagttatagtagtggtagtgactggttatagttatagtagtggtagtgactggttatagtagtggtagtgactggttataattatagtagtggtagtgactggttatagtagtggtaatgactggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagttatagtagtggtagtgactggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagttatagtagtggtagtgactggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgtctggttatagtagtggtagtgactggttatagttatagtagtggtagtgactggttatagtagtggtagtgactggttatagtagtggtagtgtctggttatagtaatagtagtggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU755252 True 1181 lncRNA 0.39 2 777539 778747

Neighbor

gene id symbol gene type direction distance location
LOC118965475 LOC106570990 coding downstream 65264 700023 ~ 712275 (-)
LOC118965589 NA coding downstream 505527 270675 ~ 272012 (-)
hmgn3 LOC106570980 coding downstream 526447 204110 ~ 251092 (-)
LOC110515871 phip coding downstream 581534 67258 ~ 196005 (-)
LOC118965602 NA coding upstream 382075 1160822 ~ 1162168 (-)
LOC118965476 ppp1r14c coding upstream 550926 1307226 ~ 1414828 (-)
LOC118965590 NA coding upstream 644740 1423487 ~ 1424991 (-)
LOC110518775 LOC106592749 coding upstream 644740 1423487 ~ 1463667 (-)
armc1l LOC106571055 coding upstream 700703 1479450 ~ 1498700 (-)
LOC110513701 LOC106570988 non-coding downstream 46656 716794 ~ 833087 (-)
G663504 NA non-coding downstream 61056 716099 ~ 716483 (-)
G663488 NA non-coding downstream 79933 696992 ~ 697606 (-)
G663497 NA non-coding downstream 88404 688868 ~ 689135 (-)
G663491 NA non-coding downstream 101438 672324 ~ 676101 (-)
G663558 NA non-coding upstream 72687 851434 ~ 855500 (-)
G663573 NA non-coding upstream 99848 878595 ~ 878833 (-)
G663577 NA non-coding upstream 102189 880936 ~ 881144 (-)
G663588 NA non-coding upstream 114897 893644 ~ 893868 (-)
G663598 NA non-coding upstream 121563 900310 ~ 900964 (-)
G663235 NA other downstream 347281 428191 ~ 430258 (-)
G663215 NA other downstream 390557 381322 ~ 388193 (-)
G664089 NA other upstream 659013 1437760 ~ 1438441 (-)
G664733 NA other upstream 1215142 1993889 ~ 1994530 (-)
G664763 rab10 other upstream 1512655 2291402 ~ 2350981 (-)
G665603 NA other upstream 2458141 3236888 ~ 3240052 (-)

Expression


Co-expression Network