G663577



Basic Information


Item Value
gene id G663577
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 880936 ~ 881144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU755313
gtccagcatcactactctggacggctctgacttagaatacgtggacaactataaatacctaggtgtctggttagactgtaaactctcctactaaactcacattaagcatatccaatccaaaatgttatcgagaatcggcttcctatttcgcaacaaagcatacttcatcatgctgtcaaacatacccttgtaaaactgaccatcctacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU755313 True 209 lncRNA 0.41 1 880936 881144

Neighbor


gene id symbol gene type direction distance location
LOC110513701 LOC106570988 coding downstream 47849 716794 ~ 833087 (-)
LOC118965475 LOC106570990 coding downstream 168661 700023 ~ 712275 (-)
LOC118965589 NA coding downstream 608924 270675 ~ 272012 (-)
hmgn3 LOC106570980 coding downstream 629844 204110 ~ 251092 (-)
LOC110515871 phip coding downstream 684931 67258 ~ 196005 (-)
LOC118965602 NA coding upstream 279678 1160822 ~ 1162168 (-)
LOC118965476 ppp1r14c coding upstream 448529 1307226 ~ 1414828 (-)
LOC118965590 NA coding upstream 542343 1423487 ~ 1424991 (-)
LOC110518775 LOC106592749 coding upstream 542343 1423487 ~ 1463667 (-)
armc1l LOC106571055 coding upstream 598306 1479450 ~ 1498700 (-)
G663573 NA non-coding downstream 2103 878595 ~ 878833 (-)
G663558 NA non-coding downstream 25436 851434 ~ 855500 (-)
G663522 NA non-coding downstream 102189 777539 ~ 778747 (-)
G663504 NA non-coding downstream 164453 716099 ~ 716483 (-)
G663588 NA non-coding upstream 12500 893644 ~ 893868 (-)
G663598 NA non-coding upstream 19166 900310 ~ 900964 (-)
G663600 NA non-coding upstream 36488 917632 ~ 917934 (-)
G663608 NA non-coding upstream 46966 928110 ~ 928402 (-)
G663616 NA non-coding upstream 52423 933567 ~ 934067 (-)
G663235 NA other downstream 450678 428191 ~ 430258 (-)
G663215 NA other downstream 493954 381322 ~ 388193 (-)
G664089 NA other upstream 556616 1437760 ~ 1438441 (-)
G664733 NA other upstream 1112745 1993889 ~ 1994530 (-)
G664763 rab10 other upstream 1410258 2291402 ~ 2350981 (-)
G665603 NA other upstream 2355744 3236888 ~ 3240052 (-)

Expression



Co-expression Network