XLOC_026378



Basic Information


Item Value
gene id XLOC_026378
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 27000787 ~ 27001407 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052461
tagacatgtaacgtactccagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatgtccagttgaggggcatcaagaacacgcagatggcctaaacctgtgtcagcctggacagactgcagttctgctactccacgccaaggcttttgtatggatgtctgactactactgtgttctctaaaggtattactggagcaaaacaacagcacctgttacagtgaaatttgtattcataaaaatagtgatacatgtgtagcaggtccagtacatgtgatgtcattgagaagttgtttttattaaatgtcattaaaacaaataaataaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052461 True 335 lncRNA 0.40 2 27000787 27001407

Neighbor


gene id symbol gene type direction distance location
XLOC_026377 nubp1 coding downstream 21994 26931710 ~ 26978793 (-)
XLOC_026376 ciita coding downstream 79312 26908978 ~ 26921475 (-)
XLOC_026375 clec16a coding downstream 94131 26823788 ~ 26906656 (-)
XLOC_026374 pigq coding downstream 194755 26792546 ~ 26806032 (-)
XLOC_026373 rab40c coding downstream 213357 26751861 ~ 26787430 (-)
XLOC_026379 CR954963.1 coding upstream 44240 27045647 ~ 27058035 (-)
XLOC_026380 atf7ip2 coding upstream 57054 27058461 ~ 27072179 (-)
XLOC_026381 CR954963.2 coding upstream 81891 27083298 ~ 27083414 (-)
XLOC_026382 NA coding upstream 287336 27288743 ~ 27290780 (-)
XLOC_026383 NA coding upstream 406866 27408273 ~ 27442493 (-)
XLOC_026372 NA non-coding downstream 320366 26663733 ~ 26680421 (-)
XLOC_026371 CR847568.1 non-coding downstream 337622 26663048 ~ 26663165 (-)
XLOC_026370 NA non-coding downstream 354154 26550201 ~ 26646633 (-)
XLOC_026368 NA non-coding downstream 584257 26411233 ~ 26416530 (-)
XLOC_026366 NA non-coding downstream 716894 26282769 ~ 26283893 (-)
XLOC_026387 NA non-coding upstream 775955 27777362 ~ 27783292 (-)

Expression



Co-expression Network