Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_026613 |
| gene name | abcc6b.1 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 36756313 ~ 36764865 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| abcc6b.1 | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in EVL; dermal bone; inner ear; opercular flap; and pronephric proximal straight tubule. Human ortholog(s) of this gene implicated in arterial calcification of infancy; coronary artery disease; and pseudoxanthoma elasticum. Orthologous to human ABCC6 (ATP binding cassette subfamily C member 6). |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050517-19 | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in EVL; dermal bone; inner ear; opercular flap; and pronephric proximal straight tubule. Human ortholog(s) of this gene implicated in arterial calcification of infancy; coronary artery disease; and pseudoxanthoma elasticum. Orthologous to human ABCC6 (ATP binding cassette subfamily C member 6). |
| ensembl_id | ENSDARG00000105403 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00051847 | True | 483 | mRNA | 0.50 | 4 | 36756313 | 36764865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_026612 | FO744883.1 | coding | downstream | 164 | 36756033 ~ 36756149 (-) |
| XLOC_026611 | abcc6b.1 | coding | downstream | 6245 | 36744518 ~ 36750068 (-) |
| XLOC_026610 | myh11b | coding | downstream | 44605 | 36667802 ~ 36711708 (-) |
| XLOC_026609 | si:dkeyp-72e1.7 | coding | downstream | 143436 | 36610085 ~ 36612877 (-) |
| XLOC_026608 | si:dkeyp-72e1.6 | coding | downstream | 149429 | 36605149 ~ 36606884 (-) |
| XLOC_026614 | abcc6b.2 | coding | upstream | 42777 | 36807642 ~ 36824190 (-) |
| XLOC_026615 | ramp2 | coding | upstream | 71846 | 36836711 ~ 36846496 (-) |
| XLOC_026616 | cntnap1 | coding | upstream | 139174 | 36904039 ~ 36944749 (-) |
| XLOC_026617 | NA | coding | upstream | 188760 | 36953625 ~ 36954088 (-) |
| XLOC_026618 | CT573704.1 | coding | upstream | 203006 | 36967871 ~ 36967993 (-) |
| XLOC_026606 | NA | non-coding | downstream | 169177 | 36583100 ~ 36587136 (-) |
| XLOC_026600 | NA | non-coding | downstream | 432688 | 36320239 ~ 36323625 (-) |
| XLOC_026588 | NA | non-coding | downstream | 1181862 | 35565128 ~ 35574451 (-) |
| XLOC_026585 | NA | non-coding | downstream | 1808252 | 34947402 ~ 34948061 (-) |
| XLOC_026619 | NA | non-coding | upstream | 204538 | 36969403 ~ 36972222 (-) |
| XLOC_026621 | CT573704.2 | non-coding | upstream | 310833 | 37075698 ~ 37075813 (-) |
| XLOC_026625 | NA | non-coding | upstream | 816657 | 37581522 ~ 37584807 (-) |
