XLOC_026588


Basic Information

Item Value
gene id XLOC_026588
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 35565128 ~ 35574451 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053069
GCTCTTTAATCTCTGGTGCTTTGTTAGCGGACCATGTGGTGTAGAAACAGCAGTGCCTTATGGGGAATAGGTCTGGGACGAAGTCATCCACAGCAtttcacatcatcagcagctGAGAGAGAGGATAAGCTGCAATGATGACTTCTGTATGACTAATTCCTCTCCCTCGGGTTGGACTGGAAACACAAGGCTGTCCTATGTGGCGAGAAATCTCAGAGCTCCAcagtcctcctcctcctcctcctccaccaacTGTGGTAAAATATGATTCACCATCTCAGGAGCTATTCTTGGTGTCTTCGTCTTATGCATGAAGCAAAAAACTTGAAAGGAACACTGGTATTGCCTGCGATGATCTCTGGTTTTAAGGTTCAGGGTACTTGCATAGAAGGACATGCTTGTCAAATGAAAGCAAACGTCTTCTCAGTCTTCTTTAGGAAGGAAGTCCACATTGGCGCTTTGGTTATTGAGGGCCTGCTCCAGCAAGGCTCTTTGTGTGATTGCAGGCAGGTAGAAGAACGCGTAGACCAGTCCCAAAAGCAGAAGGGCGATGATTAGGGGAAGTCCCCAATCTGTAGTCATTATCGGCTCTTGACAACGGGCCTGGAGGAAAGAGCCCTGCATTGTGCTGGTGGAAAAAAAGACTGAGAAATGTGACCTCTGCGTCCGCTGTCCAGAGACCGATTGAAAGTGTGTTTCCTGTTTTCTTCTTTTGGTGGGACAAACCAGCCACCAGCCGCTCTGCTTGGCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053069 True 751 lncRNA 0.48 2 35565128 35574451

Neighbor

gene id symbol gene type direction distance location
XLOC_026587 dctn5 coding downstream 10319 35550870 ~ 35554809 (-)
XLOC_026586 ndufab1b coding downstream 23747 35535121 ~ 35541381 (-)
XLOC_026585 NA coding downstream 617067 34947402 ~ 34948061 (-)
XLOC_026584 psmd11a coding downstream 748149 34801146 ~ 34816979 (-)
XLOC_026583 nsfa coding downstream 764087 34766989 ~ 34801041 (-)
XLOC_026589 gng13b coding upstream 14761 35589212 ~ 35602233 (-)
XLOC_026590 caskin1 coding upstream 58322 35632773 ~ 35801146 (-)
XLOC_026591 suz12a coding upstream 274941 35849392 ~ 35865040 (-)
XLOC_026592 rab11fip4a coding upstream 448817 36023268 ~ 36115354 (-)
XLOC_026593 coil coding upstream 545331 36119782 ~ 36127234 (-)
XLOC_026580 NA non-coding downstream 923155 34641048 ~ 34641973 (-)
XLOC_026572 NA non-coding downstream 1423947 34139637 ~ 34141181 (-)
XLOC_026558 BX649502.11 non-coding downstream 1478645 34086041 ~ 34086483 (-)
XLOC_026547 BX649502.5 non-coding downstream 1500192 34063955 ~ 34064936 (-)
XLOC_026600 NA non-coding upstream 745788 36320239 ~ 36323625 (-)
XLOC_026606 NA non-coding upstream 1008649 36583100 ~ 36587136 (-)
XLOC_026612 FO744883.1 non-coding upstream 1181582 36756033 ~ 36756149 (-)
XLOC_026617 NA non-coding upstream 1379174 36953625 ~ 36954088 (-)
XLOC_026618 CT573704.1 non-coding upstream 1393420 36967871 ~ 36967993 (-)

Expression


Co-expression Network