XLOC_026547 (BX649502.5)


Basic Information

Item Value
gene id XLOC_026547
gene name BX649502.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34063955 ~ 34064936 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051725
ATGGATATTGTGTCCACACTGGCTTTTATCATGTTTGCTCTCACAGAACTCTGTTGGTGTCAAACACTGATCGAGTCTGAAGCAGCGGTCATTAACCCGGGAGGATCTCACACACTTACCTGTACAGTCTCTGGATTCAGTAGTGATCCGTATTTGGCTTGGATCAGACAGACTGTAGGAGGAGGTCTGGAGTGGCTGGCATACATCACACCTGGTGGTACTACATACTACTCTCAGTCAGTTCAGGGGTGCTTCACCATCAAAATCTGAAAACAGCAATATAGACAGCTCTTTATGTTATCAAGATATTGTAtcacataaaacattaagaaataACAATTTTTAAGATTTACAAATGTTAAGcaggaagatttttttttgtaaattaaaaaatatatataaaatagttatTTCTTACACCAATTAAATATTTCCAGCAAAACAATATGTACTTGTACACGTGTATGTGTACTTAACCTTGCCACAATTAGTAATACTTtgatattataaatacattttaagaagGTCAagccaagaaggtcgctggttcaagcctttgctgggtcagtttgcatgttctccctgtgttaacgtaggtttcctacgggtgctccggtttcccccacaatccaaagacatgtgctataggtgaactgaataaactaaattggccaaagtgtttgtgtgtgaaagtgagtgtgtatgggtgtttctcagagttgggttgcagctggaaggacatccactgcgtaaaacatgctggataagttggtggttcattccgctgtggtgacgcctgatgaataaatggactaagctgaaaagaaaatgaatcttgTATCTGCACATGACAAAGCTGGAGACTGAAGACACTGGAGTGTATTACTGTGCTAGAAGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092540

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051725 True 900 IG_V_pseudogene 0.40 2 34063955 34064936

Neighbor

gene id symbol gene type direction distance location
XLOC_026546 ighv2-1 coding downstream 2063 34061400 ~ 34061892 (-)
XLOC_026545 ighv1-1 coding downstream 3802 34059697 ~ 34060153 (-)
XLOC_026544 BX649502.10 coding downstream 5238 34058679 ~ 34058717 (-)
XLOC_026540 ighv3-2 coding downstream 7787 34050922 ~ 34056168 (-)
XLOC_026543 ighv2-2 coding downstream 8210 34055269 ~ 34055745 (-)
XLOC_026548 ighv9-2 coding upstream 1177 34066113 ~ 34066548 (-)
XLOC_026549 ighv10-1 coding upstream 2015 34066951 ~ 34068044 (-)
XLOC_026550 ighv9-1 coding upstream 4230 34069166 ~ 34069637 (-)
XLOC_026551 ighv8-3 coding upstream 5086 34070022 ~ 34070451 (-)
XLOC_026552 ighv8-2 coding upstream 7076 34072012 ~ 34072446 (-)
XLOC_026539 BX649502.4 non-coding downstream 15302 34048205 ~ 34048653 (-)
XLOC_026538 BX649502.6 non-coding downstream 16339 34047179 ~ 34047616 (-)
XLOC_026534 BX649502.8 non-coding downstream 28324 34035192 ~ 34035631 (-)
XLOC_026529 BX649502.7 non-coding downstream 40342 34023165 ~ 34023613 (-)
XLOC_026558 BX649502.11 non-coding upstream 21105 34086041 ~ 34086483 (-)
XLOC_026572 NA non-coding upstream 74701 34139637 ~ 34141181 (-)
XLOC_026580 NA non-coding upstream 576112 34641048 ~ 34641973 (-)
XLOC_026585 NA non-coding upstream 882466 34947402 ~ 34948061 (-)
XLOC_026588 NA non-coding upstream 1500192 35565128 ~ 35574451 (-)

Expression


Co-expression Network