LOC118966108


Basic Information

Item Value
gene id LOC118966108
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69301655 ~ 69302498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053347.1
AGTGCATGTACTAAAAATGCATGAATTCAACAGGTCAGTTCATCTGGATACTTCAACTCCTAAGAACTTCACAAATCCAGTGTGTGGGTCTTCCAGTGAGTTGGAGAGGATTGAGGAACCATGGCACAGTTTGAAACCTTGACATGGACTATACCTATTATATTGGTGCTTGAAAGCATTGGATCCTGTATCACATGTGGTAGAGCCGAGTACAGAATAGGGGAGGAATGTTCTCCCATGTGTTTAAAAGgacattgagTACATAGTCATTGTACTAAATCTACATATAC

Function

NR:

description
PREDICTED: tumor necrosis factor receptor superfamily member 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053347.1 True 290 mRNA 0.40 3 69301655 69302498

Neighbor

gene id symbol gene type direction distance location
LOC110532769 LOC106572807 coding upstream 6808 69287178 ~ 69335055 (+)
LOC110532770 LOC106572808 coding upstream 34261 69261156 ~ 69267394 (+)
LOC110532762 NA coding upstream 55523 69213749 ~ 69246132 (+)
LOC110532763 NA coding upstream 103831 69192510 ~ 69197824 (+)
LOC110532776 NA coding upstream 212718 69084924 ~ 69088937 (+)
tnr5 tnr5 coding downstream 9827 69312325 ~ 70378374 (+)
LOC110532774 LOC106572817 coding downstream 24629 69327127 ~ 69367941 (+)
trnaa-ugc-38 NA coding downstream 31809 69334307 ~ 69334378 (+)
LOC110532768 tnr14 coding downstream 81899 69384397 ~ 69408200 (+)
LOC110531259 LOC106572815 coding downstream 162495 69464993 ~ 69619255 (+)
G835404 NA non-coding upstream 2048 69287663 ~ 69299607 (+)
G835403 NA non-coding upstream 16234 69283327 ~ 69285421 (+)
G835400 NA non-coding upstream 22815 69278565 ~ 69278840 (+)
G835256 NA non-coding upstream 31933 69196511 ~ 69269722 (+)
G835391 NA non-coding upstream 76652 69203537 ~ 69225003 (+)
G835255 NA non-coding downstream 126290 69428788 ~ 69430840 (+)
G835461 NA non-coding downstream 160067 69462565 ~ 69463473 (+)
G835472 NA non-coding downstream 171657 69474155 ~ 69474616 (+)
G835483 NA non-coding downstream 197574 69500072 ~ 69500604 (+)
G835266 NA other upstream 57177 69239596 ~ 69244478 (+)
LOC118965941 cyp2k5 other upstream 678816 68619611 ~ 68625512 (+)
LOC110532749 LOC106572763 other upstream 719245 68564136 ~ 68582410 (+)
LOC110531253 LOC106572751 other upstream 831146 68451084 ~ 68470509 (+)
G836274 LOC106581772 other downstream 730494 70032992 ~ 70033227 (+)
G836374 NA other downstream 906180 70208678 ~ 70209635 (+)
LOC110532786 LOC106572841 other downstream 1451853 70754295 ~ 70759695 (+)
G837369 NA other downstream 1930288 71232786 ~ 71233424 (+)
znf335 LOC106572852 other downstream 2078661 71376417 ~ 71415664 (+)

Expression


Co-expression Network