G835266


Basic Information

Item Value
gene id G835266
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69239596 ~ 69244478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU950021
CAGGGCACTACACCATCGCGATCAAATCTTCGGTCAGTTCATCTCGATACTTCAACTCCTAAGAACTTCACAAATCCAGTGTGTGGGTCTTCCAGTGAGTTGGAGAGGCTTGAGGAACCATGGCACAGTTTGAAACCTTGATATGGACTATACATATTTTGTTGGTGCTTGAAAGCATCGGATCCTGTATTGCATGTGGTAGAGCTGAGTACAGAATAGGGGATGAATGTTGTCCCATGTGTTCACCAGGAAATCGTGTACATAGGCATTGTACTGAATTCACCAGCACCAGCTGTGCGCCCTGTGTTGATTCTACGTTCCTTGATGAGCCCAATGGTCTCATAAAATGCAAAGTGTGTACCAACTGTGATCCAGGTTTGGGTTTGAAGGTAAAGCTGTCATGTAGACCTTCATCAGACACTGTCTGTGGGACACTGGAGGGGTTCTACTGTCTAGACCCAACTAAGGATGGTTGTAGAGCAGCCCAGAGACACAGCAGCTGTGAACCTGGTCAATACATCAGTCACACAGGAACAACATCTACAGATACTGTGTGTGCTGTCTGCCCTGATAAAACTCATTCAGATGGATCATTAACATCTTGTCAACCACATACAGAATGTGAATTCTTGGAAATTGAAGCAGGAACTCCTTGGTCGGATTCAGAATGTGGAGTAGCC
>TU950022
GCAAgatttcagagacttgtcccgaagccactcttgcgttgtcttggctgtgtgcttagggtcgttgtccttttggaaggtgaatcttcgccccagtctgaggtcctgagtgctctggagctggttttcatcaaggatctctgtactttgctccgttcacctttccctcgatcttgattAGGGGGGTGGCAAGGCAAATAGTCTGGTTAGGtgtttgactagatgttcaggagtcttatggcttgggggtgccttgcggtcggaggccgagcagttgccataccaggcagtgaagcaaccagtcagaatgctctcgatggtgcagctgtggaaccttctgaggatctgaggacccatgccaaatcttttcagtctcctgagggggaataggttttgtcgtgccctcttcacgactgtcttggtgtgcttagaccatgttagtttgttggtgatgtggacaccaaggaacttgaagctctcaacctgctccactgcagccccatcaatgagaatgggggtgtgctcggccatctttttcctgtagtctacaatcatctccaGGCAATCATGCCGAGACCATGGTTCTCTTTCACAGATGAGCCTTGCATGAACATCAATAAACAGCAGACCCGATTACATGTTTCTACGCACGAGTTTAGCTAACCAACGTAGGGATGACGTCTCCTACAAGTCTGGCCGAGGATTTCTATTGGTGAAGCAGTTGTAGTCTGTTCACACGACTGTCTAAGGTCAGTTCATCTCGATACTTCAACTCCTAAGAACTTCACAAATCCAGTGTGTGGGTCTTCCAGTGAGTTGGAGAGGCTTGAGGAACCATGGCACAGTTTGAAACCTTGATATGGACTATACATATTTTGTTGGTGCTTGAAAGCATCGGATCCTGTATTGCATGTGGTAGAGCTGAGTACAGAATAGGGGATGAATGTTGTCCCATGTGTTCACCAGGAAATCGTGTACATAGGCATTGTACTGAATTCACCAGCACCAGCTGTGCGCCCTGTGTTGATTCTACGTTCCTTGATGAGCCCAATGGTCTCATAAAATGCAAAGTGTGTACCAACTGTGATCCAGGTTTGGGTTTGAAGGTAAAGCTGTCATGTAGACCTTCATCAGACACTGTCTGTGGGACACTGGAGGGGTTCTACTGTCTAGACCCAACTAAGGATGGTTGTAGAGCAGCCCAGAGACACAGCAGCTGTGAACCTGGTCAATACATCAGTCACACAGGAACAACATCTACAGATACTGTGTGTGCTGTCTGCCCTGATAAAACTCATTCAGATGGATCATTAACATCTTGTCAACCACATACAGAATGTGAATTCTTGGAAATTGAAGCAGGAACTCCTTGGTCGGATTCAGAATGTGGAGTAGCC
>TU950020
cgaaggcacaagAGAAGATAGAAAACTGCATTTTCCACCGTTAATAAACTGCACTCCGGATCGATGGCAGAGCGCAAAACACTATCGTATCTGTTTCCTACTGTGAAGTGGGTCCAATTAAATAAGAGATTGGATGAATGTCTTCCTTTTTGTAGGCCTACGCTACCTGTTGAGTTTGAAAAGATCACAGAGATGGTGAGGAATTTATTATGCAATGATCATGGAAATGaataaacacatttatttaacGTTTCTTTAAGCAGGGAGTCATGCCGAGACCATGGTTCTCTTTCACAGATGAGCCTTGCATGAACATCAATAAACAGCAGACCCGATTACATGTTTCTACGCACGAGTTTAGCTAACCAACGTAGGGATGACGTCTCCTACAAGTCTGGCCGAGGATTTCTATTGGTGAAGCAGTTGTAGTCTGTTCACACGACTGTCTAAGGTCAGTTCATCTCGATACTTCAACTCCTAAGAACTTCACAAATCCAGTGTGTGGGTCTTCCAGTGAGTTGGAGAGGCTTGAGGAACCATGGCACAGTTTGAAACCTTGATATGGACTATACATATTTTGTTGGTGCTTGAAAGCATCGGATCCTGTATTGCATGTGGTAGAGCTGAGTACAGAATAGGGGATGAATGTTGTCCCATGTGTTCACCAGGAAATCGTGTACATAGGCATTGTACTGAATTCACCAGCACCAGCTGTGCGCCCTGTGTTGATTCTACGTTCCTTGATGAGCCCAATGGTCTCATAAAATGCAAAGTGTGTACCAACTGTGATCCAGGTTTGGGTTTGAAGGTAAAGCTGTCATGTAGACCTTCATCAGACACTGTCTGTGGGACACTGGAGGGGTTCTACTGTCTAGACCCAACTAAGGATGGTTGTAGAGCAGCCCAGAGACACAGCAGCTGTGAACCTGGTCAATACATCAGTCACACAGGAACAACATCTACAGATACTGTGTGTGCTGTCTGCCCTGATAAAACTCATTCAGATGGATCATTAACATCTTGTCAACCACATACAGAATGTGAATTCTTGGAAATTGAAGCAGGAACTCCTTGGTCGGATTCAGAATGTGGAGTAGCC

Function

NR:

description
tumor necrosis factor receptor superfamily member 14-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU950021 False 680 TUCP 0.46 7 69239596 69244478
TU950022 False 1397 TUCP 0.48 8 69240379 69244478
TU950020 True 1099 TUCP 0.44 7 69242214 69244478

Neighbor

gene id symbol gene type direction distance location
LOC110532763 NA coding upstream 41772 69192510 ~ 69197824 (+)
LOC110532776 NA coding upstream 150659 69084924 ~ 69088937 (+)
LOC110531258 NA coding upstream 246524 68917184 ~ 68993072 (+)
LOC118966105 NA coding upstream 334070 68901391 ~ 68905526 (+)
LOC118966104 LOC106572753 coding upstream 344756 68890470 ~ 68894840 (+)
LOC110532770 LOC106572808 coding downstream 16678 69261156 ~ 69267394 (+)
LOC110532769 LOC106572807 coding downstream 42700 69287178 ~ 69335055 (+)
LOC118966108 NA coding downstream 57177 69301655 ~ 69302498 (+)
tnr5 tnr5 coding downstream 67847 69312325 ~ 70378374 (+)
LOC110532774 LOC106572817 coding downstream 82649 69327127 ~ 69367941 (+)
G835391 NA non-coding upstream 14593 69203537 ~ 69225003 (+)
G835335 NA non-coding upstream 183656 69043733 ~ 69055940 (+)
G835320 NA non-coding upstream 211092 69025560 ~ 69028504 (+)
G835263 LOC106572754 non-coding upstream 227398 69005446 ~ 69012198 (+)
G835400 NA non-coding downstream 34087 69278565 ~ 69278840 (+)
G835403 NA non-coding downstream 38849 69283327 ~ 69285421 (+)
G835404 NA non-coding downstream 43185 69287663 ~ 69299607 (+)
LOC110532768 tnr14 non-coding downstream 154031 69384397 ~ 69408200 (+)
LOC118965941 cyp2k5 other upstream 616757 68619611 ~ 68625512 (+)
LOC110532749 LOC106572763 other upstream 657186 68564136 ~ 68582410 (+)
LOC110531253 LOC106572751 other upstream 769087 68451084 ~ 68470509 (+)
G834235 NA other upstream 951071 68287215 ~ 68288525 (+)
G834228 NA other upstream 971188 68268037 ~ 68268408 (+)
G835268 LOC106572807 other downstream 42798 69287276 ~ 69367788 (+)
G836274 LOC106581772 other downstream 788514 70032992 ~ 70033227 (+)
G836374 NA other downstream 964200 70208678 ~ 70209635 (+)
LOC110532786 LOC106572841 other downstream 1509873 70754295 ~ 70759695 (+)

Expression


Co-expression Network