G775603


Basic Information

Item Value
gene id G775603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16045612 ~ 16047293 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU883814
acagggagggaggcagagagacagacaggcagccagaaAAGCAGGTAGGCAGGAAGCAACTTACCTAGCTTCCCACTTCTACTTCACGTCCTTTTTTGTCTTCTTTCATCTTTCTTTTATTTTGGTCCAGAACTCTTTGCTTTTCCCCTGCCCCTTTGTCAAAGGCATTCTCTTCTCacactgtatttatttttacatttttaacagTATTCCTAGAAAACAATTATTTCCTCCTGTAAAGTCAGTGGTATTTTTTGGGCAGTTCTCAGTATCTGTGTCAAACTCAGATATTCACCCAGCTTCAATCCCTTCAAGACTTCGACCAGTAAACAACTAGACGAGTAGAGAAGTAACGGTCAtgtgatccctctctctctctcgtctgacCATCTCTTTCAATAACAACTCCTTTTCCTGCGGCTGTAAAGTCCTGTGTTTGTGTTGTACGTTCAGCCGACTCTGTTCTTGTGCACGGTGTTGGAACCACATGGAAAAGCAGCGCTAAAAAGCTAGTACGTGTGTTTCATTTAAGGAGAGGCCATTCTCATTTTCAAAAAATAACATTCAAAGGCACCACAGAAGGAAATCTAACCTTTGCCCTTCCTGGGTTGAAGATGATAGTGCTTTCATAGCAAATAGCTCAGCATCAAACagtttctctctttatctctctctctctttctctctctttttctctctctctctgctctcgctGACTTTTGTTACGCGTTTTCTCCTGACACCGTGCAACACTGAAAATTCACCTTCATATACAAATAAACCCATGTCAGAGAGATGTGACTGGGGGTAGAAcataccagggttggggtcaatacCATTTAAGTTCCAGGCAATTCAGGCAGTACACTGACATTTCAATTCTGATTCTATTCAATGCTTTTTAATAAGGAACATTTGGGATTGGATTTGGAATATGGTTTACTTTAtgaattgaatggaattgaaattgaattgacccCAAACCTGGAGAacactgtttcctctcctccttcaggctctCCAGGGCCCATATTCCCAAAGTATCTGAAACACGTTGTAAATATGGGcccagttcctctctctctctctctctatacgtGGTGCTACTGTATCATGACTTTGATGGTTTTATGCGATTGTGTGGCaatgtttgtttatttaaaaaataaataataataataaagtacAGAGGCAGTGTTTTGTTCTTATGCACAGTAAGGTTATGTGAGGGTACAGTATATAAGGCCATTCAGTACATTGTTTCCTTTTGGCAGTAAAGTTGAAGCCTGATTCCCAATCTGTGTGTGCTTAAGCCAACTATAATTTGTCATGCTGTTGGATAAAAGTACAAACTGATCTGTGATCAGGCTAAGTAAAAGTTGTGTTCGACCATGTCAAGTTAATCGGCACCGTTCTACTACTCACAGTGAAGAACAACTacaatgtaaatatatggatATTAGCACAAGTATCTCCATCTCAGTACCATGTGatgtttacaacaacaaaaaacaacaacatcaagaaacagcaacaacaaaaaacaacaaaaaaagacagaAAAAATTAAAAACGTGATATATGCTTTACAATTCTTTGTCTCATTAACAAATTGCACTTATTTAAAGAgactttctttgtgttctggtTTGAAAAAGTGGTTTTCAAGCTCTCTGGCTCGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU883814 True 1682 lncRNA 0.39 1 16045612 16047293

Neighbor

gene id symbol gene type direction distance location
LOC110531610 LOC106577838 coding downstream 15714 15991941 ~ 16029898 (-)
trnal-cag-5 NA coding downstream 31994 16013536 ~ 16013618 (-)
LOC110531609 LOC106577837 coding downstream 65811 15951928 ~ 15979801 (-)
LOC110532935 LOC106577836 coding downstream 154343 15867906 ~ 15891269 (-)
LOC118966003 NA coding downstream 188406 15854217 ~ 15857206 (-)
LOC110531611 LOC106577839 coding upstream 1451 16048744 ~ 16087030 (-)
LOC110531612 LOC106577840 coding upstream 48669 16095962 ~ 16117909 (-)
trnak-cuu-4 NA coding upstream 85752 16133045 ~ 16133117 (-)
trnan-guu-3 NA coding upstream 86312 16133605 ~ 16133678 (-)
gba2 gba2 coding upstream 138964 16186257 ~ 16220121 (-)
G775602 NA non-coding downstream 1820 16043489 ~ 16043792 (-)
G775600 NA non-coding downstream 2869 16042380 ~ 16042743 (-)
G775599 NA non-coding downstream 3279 16041968 ~ 16042333 (-)
G775596 NA non-coding downstream 7702 16037523 ~ 16037910 (-)
G775594 NA non-coding downstream 11264 16034033 ~ 16034348 (-)
G775612 NA non-coding upstream 16633 16063926 ~ 16065846 (-)
G775645 NA non-coding upstream 72974 16120267 ~ 16127928 (-)
G775650 NA non-coding upstream 81500 16128793 ~ 16129615 (-)
G775651 NA non-coding upstream 83456 16130749 ~ 16131239 (-)
G775653 NA non-coding upstream 85016 16132309 ~ 16132581 (-)
G775532 NA other downstream 132318 15912836 ~ 15913294 (-)
G775139 NA other downstream 181778 15862320 ~ 15863834 (-)
LOC110531603 groa other downstream 258006 15781909 ~ 15787666 (-)
G774954 NA other downstream 419692 15625202 ~ 15625920 (-)
G774702 LOC106577875 other downstream 684293 15352307 ~ 15361319 (-)
LOC110531626 LOC106608856 other upstream 779760 16827053 ~ 16828583 (-)
G776294 NA other upstream 818174 16865467 ~ 16866034 (-)
G776340 LOC106577790 other upstream 962719 17010012 ~ 17014685 (-)
G776355 NA other upstream 978087 17025380 ~ 17025813 (-)
G776461 NA other upstream 1198141 17245434 ~ 17245797 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033465 NA non-coding NC_007118.7 CM002891.2 8835309 ~ 8840615 (+)