G815427


Basic Information

Item Value
gene id G815427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50795675 ~ 50796164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU927550
TTTCtacaatatatacagtgttgtgaaGTATTAAAAGGGCAGTGCCATCAAAAACTTGATTTCCTGTTATTCTGATGATATTTCCACAATGAGGTCGAATAACACTATGAAGTTGTGAAAATGATGTAacagatttttttaaagaatgtctggaatttcagcctgttcaggtgggatgaAGTTTTTGACCAagatcatgacatcacaatcagATCTTATTAttctgaccaatgaccagtcataTTTTATTTGCACGCGTAATCCTCCTACTTTGAAGGGTTAAGCTGAGTAGGCTGTAGagcaggggtactcaactcttaccctacgaggtccagagcctgctggttttctgttctacctgataattgcacacacctggtgtcccaggtctaaatcagtccctgattataggagaacaatttaaaaaacacagtggaactgtcttcgaggtccagagttgagtgaAGGGGTCTAGACAATTAAATCCGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU927550 True 490 lncRNA 0.40 1 50795675 50796164

Neighbor

gene id symbol gene type direction distance location
si:dkey-178k16.1 LOC106572064 coding upstream 238178 50445552 ~ 50557497 (+)
LOC118966068 NA coding upstream 367581 50423446 ~ 50428094 (+)
fam217b LOC106572066 coding upstream 387305 50402564 ~ 50408370 (+)
LOC110532305 LOC106572068 coding upstream 436312 50224844 ~ 50359369 (+)
LOC110532304 LOC106566492 coding upstream 590669 50138196 ~ 50205006 (+)
cntn3a.2 LOC106572060 coding downstream 169553 50965717 ~ 51041645 (+)
exosc10 exosc10 coding downstream 248251 51044415 ~ 51056932 (+)
srm srm coding downstream 264908 51061072 ~ 51067904 (+)
cort LOC106572313 coding downstream 310163 51106327 ~ 51107746 (+)
LOC110531197 NA coding downstream 328971 51125135 ~ 51127512 (+)
G815426 NA non-coding upstream 242 50795214 ~ 50795433 (+)
G815423 NA non-coding upstream 2704 50792739 ~ 50792971 (+)
G815407 NA non-coding upstream 22363 50773112 ~ 50773312 (+)
G815404 NA non-coding upstream 27463 50767984 ~ 50768212 (+)
G814639 NA non-coding upstream 230280 50473415 ~ 50565395 (+)
G815509 NA non-coding downstream 104013 50900177 ~ 50900647 (+)
G815516 NA non-coding downstream 116180 50912344 ~ 50912554 (+)
G815517 NA non-coding downstream 117760 50913924 ~ 50914154 (+)
G815526 NA non-coding downstream 124702 50920866 ~ 50921079 (+)
G815528 NA non-coding downstream 126611 50922775 ~ 50923001 (+)
G813139 NA other upstream 1680057 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1788965 48962187 ~ 49006710 (+)
G813071 NA other upstream 1835684 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 2225082 48545454 ~ 48570593 (+)
G812143 NA other upstream 2813374 47982001 ~ 47982301 (+)
G815428 NA other downstream 50 50796214 ~ 50800381 (+)
G815610 NA other downstream 282283 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 549208 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 1527107 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 1930257 52692676 ~ 52734929 (+)

Expression


Co-expression Network