G815516


Basic Information

Item Value
gene id G815516
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50912344 ~ 50912554 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU927644
aattgagatggtttgggatgagttggactgcagagtgaaggaaaagcagtcaacaagtgctcagtataagtgggaactccttcaagactgttggaaaagcagtccaggtgaagatggttgagagaatgccaagagtgtgcatagctgtcatcaaggcaaagggtggctacattgaagaatctaaaatatatttgaacactttttgggttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU927644 True 211 lncRNA 0.42 1 50912344 50912554

Neighbor

gene id symbol gene type direction distance location
si:dkey-178k16.1 LOC106572064 coding upstream 354847 50445552 ~ 50557497 (+)
LOC118966068 NA coding upstream 484250 50423446 ~ 50428094 (+)
fam217b LOC106572066 coding upstream 503974 50402564 ~ 50408370 (+)
LOC110532305 LOC106572068 coding upstream 552981 50224844 ~ 50359369 (+)
LOC110532304 LOC106566492 coding upstream 707338 50138196 ~ 50205006 (+)
cntn3a.2 LOC106572060 coding downstream 53163 50965717 ~ 51041645 (+)
exosc10 exosc10 coding downstream 131861 51044415 ~ 51056932 (+)
srm srm coding downstream 148518 51061072 ~ 51067904 (+)
cort LOC106572313 coding downstream 193773 51106327 ~ 51107746 (+)
LOC110531197 NA coding downstream 212581 51125135 ~ 51127512 (+)
G815509 NA non-coding upstream 11697 50900177 ~ 50900647 (+)
G815427 NA non-coding upstream 116180 50795675 ~ 50796164 (+)
G815426 NA non-coding upstream 116911 50795214 ~ 50795433 (+)
G815423 NA non-coding upstream 119373 50792739 ~ 50792971 (+)
G815407 NA non-coding upstream 139032 50773112 ~ 50773312 (+)
G815517 NA non-coding downstream 1370 50913924 ~ 50914154 (+)
G815526 NA non-coding downstream 8312 50920866 ~ 50921079 (+)
G815528 NA non-coding downstream 10221 50922775 ~ 50923001 (+)
G815536 NA non-coding downstream 25454 50938008 ~ 50938217 (+)
G815543 NA non-coding downstream 32858 50945412 ~ 50945755 (+)
G815428 NA other upstream 111963 50796214 ~ 50800381 (+)
G813139 NA other upstream 1796726 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1905634 48962187 ~ 49006710 (+)
G813071 NA other upstream 1952353 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 2341751 48545454 ~ 48570593 (+)
G815610 NA other downstream 165893 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 432818 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 1410717 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 1813867 52692676 ~ 52734929 (+)
G819897 NA other downstream 3814317 54726871 ~ 54727376 (+)

Expression


Co-expression Network