G836095


Basic Information

Item Value
gene id G836095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 69896918 ~ 69999359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU950990
tattttaacctttctgatctccccatcccggatccgggttcgtgaatacagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccattgcaaaacaatcatttgtgtaacagtattgatggctaacgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaaaaaatcatttacctttgaagaacttcagatgttttcaattaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaatcatttgtgtaaaagtagctagctagcgttagcatttagcgttagcatttagcgttagcattagcgttagcatccagcacgcaacatttcaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattctttgtgtattagaaatagctccgttttatacatcacatttggctaccaaaaaaaatcagaaaattcagtcctcaaaacgcgaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacattgttcttggacacatggtttctcccctatatcaaatggaaaagtacgagcagctggcaattgcgcaccgaattccacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU950990 True 1196 lncRNA 0.36 2 69896918 69999359

Neighbor

gene id symbol gene type direction distance location
LOC110531260 LOC106572818 coding upstream 151632 69643342 ~ 69745286 (+)
LOC110531259 LOC106572815 coding upstream 277663 69464993 ~ 69619255 (+)
LOC110532768 tnr14 coding upstream 488718 69384397 ~ 69408200 (+)
LOC110532774 LOC106572817 coding upstream 528977 69327127 ~ 69367941 (+)
trnaa-ugc-38 NA coding upstream 562540 69334307 ~ 69334378 (+)
LOC110532792 pex10 coding downstream 371786 70371145 ~ 70376083 (+)
LOC110531266 tm9sf4 coding downstream 391760 70391119 ~ 70416968 (+)
pofut1 pofut1 coding downstream 502077 70461311 ~ 70508110 (+)
kif3b LOC106572821 coding downstream 510764 70510123 ~ 70521031 (+)
LOC110532787 LOC106572837 coding downstream 728536 70727895 ~ 70749329 (+)
G836044 NA non-coding upstream 112569 69784144 ~ 69784349 (+)
G835563 NA non-coding upstream 207526 69688421 ~ 69689392 (+)
G835562 NA non-coding upstream 208932 69687262 ~ 69687986 (+)
G835539 NA non-coding upstream 256320 69637432 ~ 69640598 (+)
G835507 NA non-coding upstream 327797 69568066 ~ 69569121 (+)
G836265 NA non-coding downstream 28253 70027612 ~ 70027995 (+)
G836306 LOC106572833 non-coding downstream 74184 70073543 ~ 70075734 (+)
G836307 LOC106572833 non-coding downstream 79138 70078497 ~ 70080266 (+)
G836309 LOC106572833 non-coding downstream 82501 70081860 ~ 70085066 (+)
G836315 NA non-coding downstream 97629 70096988 ~ 70097189 (+)
G835268 LOC106572807 other upstream 529130 69287276 ~ 69367788 (+)
LOC110532770 LOC106572808 other upstream 630444 69261156 ~ 69267394 (+)
G835266 NA other upstream 652440 69239596 ~ 69244478 (+)
LOC118965941 cyp2k5 other upstream 1274079 68619611 ~ 68625512 (+)
LOC110532749 LOC106572763 other upstream 1314508 68564136 ~ 68582410 (+)
G836274 LOC106581772 other downstream 33633 70032992 ~ 70033227 (+)
G836374 NA other downstream 209319 70208678 ~ 70209635 (+)
LOC110532786 LOC106572841 other downstream 754992 70754295 ~ 70759695 (+)
G837369 NA other downstream 1233427 71232786 ~ 71233424 (+)
znf335 LOC106572852 other downstream 1381800 71376417 ~ 71415664 (+)

Expression


Co-expression Network