LOC110533654 (LOC106603527)


Basic Information

Item Value
gene id LOC110533654
gene name LOC106603527
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 32368686 ~ 32422880 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618082.2
AGGTGGGTGGGTTTCCCCTCCTCTCAAAGAAATGTGCTAGTCTGCAAGCCACCATCAACAATAATCTACTGCCCCACAGGCGCTCGAGGACCGAGGTGAAGGGAACTCAAACACCCGTGAATTCCCTTGACGATTTGACAAAGGATTAGCTAGCTACAAGAGATAGTATGGACAAAGAGGAGCAGTTTGTCAACATCGACCTAAACGACGACAACATCTGCAGTGTCTGCAAGCTAGAGACCGACACGGGGACCATGTCCTTCTGCCACGTCTGCTTTGAGCTCAGCATCGAAGGTGTGTCTCATGCCACCCTCCTGCACACCAAATCCCTACGGGGCCACCGGGAGTGTTTTGAGAAGTATCACCTCATTGCCAACCAGAAGCTGTCCCGCTCCAAGGTCTCCCGCAGTCCCTACGAGGGCATGAAGCTGGCCCTTAGCCAGAAGATCAGCCGCATTGTGCAGTACGCCCAGAACAAAGACTCTGTCAGCTCAGAGGGGAGTCCTGGCCGTCGGGGGGGCAAGCACCAGCTCCTCTGCTACAGCCAGAATGGAGACCGTAAACTACTGCCCCAGTCGGATGCCCAGGTGCCCCGCTACACCCCACGCTGGAACCAGGGGATTGGGGCAGGAGGGCTGCCGGACTACGCCACGAGTATGCTGGAGTGCCACTCGGCCGAGGAGCTGGGGCTACTGGAGGACGGGCGCGACCTCGGGGCCCTGTGGGGGGTCACAGGGAGGAGGGGCCATCTTCACCGCAGCCACAGCCAGTCTTCTGGAGGAGACCACCAGACACTGCATTCAAACAATGGTCACAGCAGAGACGAGTTGATTAAAATGAGTGTGGACGAGCTCCACCAGCTGAATGGGCAGCTGCTGCTACAGATTCAAAaggtgtttgaagagctgacaGTGGCTGTGCAGGAAAAAGACTCACTGGCGTCGGAACTGCATGTTCGCCACATCGCCATCGAGCAGCTCTTCAAGAACTGTGCCAAGCTGCCCTGGCTGCAGATCAGCCGGGCCGGGTCCGTGGTCAAGGCCAGCAGCAACGCCTCTGTGGAGTGAGGGGAGTCTGGGGGTACCTACCTGGCTTGGCTGCCTCTCACTCCCAGGgctaaaagacagacagacaggatggcCACTGTGGCCCGTGCCCTTTATATTGTAAAAGACTTGTTGCGTGGTGTGGTTTCTCTCAGAAGAGTGAGGAATGGACATGGCCTCCTCTCATCTGGTGCTCCATGGCTTTCTGACTGCAGTACTTTGAAGAAGGGGCTCAGAGAAAGGCAATAAAATTAAAGGATCTTGGGATCCACTGACTTCCACATGGGAACTGTGGGTTGTTGAGCCCCGCTGTCGGTGGACCTGTTGCCTATGCAGACAAAGTATTTTTGAAAGAATACCTATTCAGATTTAATACAGAATGACATGAGCGAATACTAGTGTATATACTAGtaattgccaaaataaaggaacacttgagtaaattaaataaagtatattgaaagcaggcaGGGCTCCACATTTAGATTGGTTAGCATCATGGTTGCACTATTACTACAGTGAAAACAGCTTGCTTCTAGCTCAACCAGGTCAAAAGATCTGACCAATTTTACCGGCACAACATTTGTATCTTCCTATAGCCGAGCGGCTCGCCGGGACTGCGTTTTAGATTCATAAACCATGTCGTGGGCCGTTCTAAAACTACTCACGCGTCGACAACCTTTTGTTTACActttgttcagtcatgttaccttgttcactagctagctaacaacctggtaacagaaagaaaggaaaaggggTAGCTTCTTCAGGAGATCAGTGATCATAGCAGTGAATGAATGACAGAAATCTTGCATGTCAACATCACAAACCTGATGTTTTTAAGGAGACCGTGTACAATTTTCTATGTAATGCATCTCAATAGGAAAATGCTGCTTTTACACCAAATGTAGACAATATTCCACAAATTACTTTATTTCAATGACAGGTATTcgtatcatcattttagcttttatAATAAACAAATGCGTTTACAGTGTTCCATATTGGTTTCTAGGTCACAACGTGCTTCAGAAGTAACTAGAATTTgtaggctgcatttacacaggcagccaaattctgattaaaaaaaaaatcactaattggtctttggtctttccaatcagatcagctctgaaaaagatctgatttgAAAAGATCCTATGTGATTGATCAAAAGAACAATaggtggaaaaaatatcagaatttatCTGCCTGTGAAAATGTAGCAATATAGGCCCAATCTCAATCAACTTTTCTGGTGGTCCTAAATTTAATTTGGTGCTCCCATCTTTAAGTTACCAATGAAACATTTGAATTTAGAGCcctgaaagcaggtgcttccacatgcgtggttcctgagttaattaagcaattaacatcctatCCCATCCATGTATAAACAATCCCAGTTGACCAGTACTTTGGCTAACATGGCTAGAAAAGGGGTGTCAAAGGTGCGTAGGGGGTTTAGTGTGGGTGTTTAGTGGGGGAtttagtgtgtgtctgtcagttacCAGaagggtatactacaaagcatgATCaaggagttagccagctaacttgcctaAATGTTCTGAAATAACTGTCTCGGGTACATAAATGTTCTGAAATAACTTTATTTTTTAGAAAGATAAGCTTGATATGGGCATGGTCTAATTGACTCGACAACCAAATAAGTTTAGCTGTCTTAATGAACCAGAAAACCAATCGTTATTTCTGGTTGttttatcaaagttagctggctatcTCATTGagcctgctttgtagtatacccctctaatctcaacccaattgaaaacttatgggagattctggagcggcgcctgagactGCCTTTTTCACCACCATCaataaaacaccaaattatggcaTTTCTTGTGggagaatggtgttgcatccctccaatagagtttcaGACACTTGTGGAATCTATGCCCAGgggcattgaagctgttctggtattttgttggcatttcttttattttggcagttacctgtatctagCTGCAGTTCTCTTTTTACAATGACAGTTTTTATTTATTGAATTTCCTCACtcttttacattttttgttttctttttgttaTTTTAATCACATTTCCTCACTCCTCAGAAAATATTTGGTTGACTGATTCTGTTGTTGCTGTGGTAACTGTTACTAAATGAGAGGTTATTTTGGATTCAGTGCAGTGAAACACTCTTGCGGTTTGAATAAAGTCTGTTACATGTAAGAGGTGGGATTTTAAGTCCAGAGGTTACAGTTTGTTGCTTTTATTATTTCTccagtttttgatttgattttgatgtctTGTTTGTATTCTTATTTGTTTTGAGGTTTGTTAGTGGCATGCTGCAAGTGCTGTTTTCTGCTATTCTTAACTTTAAGTCCTCTTGATTTCAACTGGGAAGGTATTTTATGGTAGCCTGTGGTAAGGCTGATGAGCTCAAGTCATGTATTTGAACAAGGGAGGGACATGAAATGTGTGCTGATGATAGAAAAGGCCTAACTCGGTAAGCATTATATTGTCCATTTGCCAAACCAAAGCCTTTATTTGCTTCAAGGCAGCAAATATCAGTATTTATTATTTAACTTGACAAGTATAGGCCTCGCTAGACCAACTAGAATTGATATGAAACGCAATAGAATACACTGATACCAAATTCACTTGAAATGTGGCTCAATGATAAACTTGTGACTCTATAAAATTGGTTTAGCTGTAATGTCCTGCGTTATGAACTGCTCACAattcagcaggtagcctagcggttaagagcttttgggccaataaccaaaaggtcactggttcgaatccccgggCCGAttaagtgaaaaatctgtcaatgtgcccttgagcaaggcacttcaaatctaattttattagtcacatgcaccgaatacaacaggtgtagacctttacagtgaaatgcttacttacaagcccctaaccaacaacgccgttaaaaaaatacaaataagaaataaaagtaacaagcagttaaagagcagcagtaaaataacaatagcgtaacttctatacagggggtacaggtacagagtcaatgtgcggggaacAGGTTGCTtttgtaaatcgctctggataaagAGCGACTGCTAAATGACGTATTCTCCCCTGGTTTCACTGTCTGTCAAGTTGATGTTAGGTTGTGTGACTGAGTTTATTCAAGCAATTATtcgtatatttttttttattttgtggtTGTGTGTTTCAAGTGTGCTTTGGTTTTTACTTGTTTTATTTTAGCTAATCATTTTCTGGTGGCAGGTCTATGCTGTGTGGAGTTCAAATGATGTCTAAACTGCCGAATCCAGTTTTCTCTTAATACGATGTGTCCATTTAGTTTTAAAGGCACTGATCTGAATGGTGAAAAGAAAGCAATATGATGGAAAGGCCAAATAATGATTAATTTGACCTGTCCAGCCTGGTCAGATCAGTGATTTTGAAGAAAAGGAGACAAACAAATTAACTAGCCTTCATTAATATTTGGGACACAGATGTAGTAAGAAAACGGATCAATACTTAGACCTGCATGTGAAATGTAGGCATACTCTGGTGGTTTGAAACAGCTGTAGAGGTTCTGATCACTGAAGTGGACCCTCTATCATTGGCCCAACAAGAATGTGTATATTTTGGGTAGAAAGAAACAAATATATTCAGGTTGATGCATTTGAATCGTCCAATGTCAGTCTCTCTTTATAAGAGATCAGGTTTGACCCCTTTGGGGTTTACAAGAAAGGTTTTAGCTCTGCTTTCAACTTATCCTGCTTTTGTTTGGATTAATAAATGTGTATTCTTCCGAGCGTGA

Function

NR:

description
protein EURL homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618082.2 True 4872 mRNA 0.43 5 32368686 32422880

Neighbor

gene id symbol gene type direction distance location
LOC110533653 LOC106603526 coding downstream 12040 32353917 ~ 32356646 (-)
LOC110533652 LOC106603525 coding downstream 15484 32246991 ~ 32353202 (-)
LOC110533647 LOC106603522 coding downstream 1208176 31154471 ~ 31160510 (-)
LOC110534882 NA coding downstream 1346461 31021462 ~ 31022225 (-)
LOC110533642 LOC106603612 coding downstream 1410491 30954608 ~ 30958195 (-)
LOC110533655 LOC106603528 coding upstream 10006 32432886 ~ 32447490 (-)
LOC110533657 LOC106567954 coding upstream 39679 32462559 ~ 32485561 (-)
LOC110533656 LOC106603531 coding upstream 65447 32488327 ~ 32496739 (-)
LOC110533661 LOC106603536 coding upstream 101546 32524426 ~ 32557392 (-)
LOC110533665 LOC106603540 coding upstream 453359 32876239 ~ 32911266 (-)
G879453 NA non-coding downstream 125439 32243021 ~ 32243247 (-)
G879371 NA non-coding downstream 254405 32106240 ~ 32114281 (-)
G879269 NA non-coding downstream 392124 31929936 ~ 31976562 (-)
G879295 NA non-coding downstream 396465 31970613 ~ 31972221 (-)
G878917 NA non-coding downstream 1012289 31352071 ~ 31356397 (-)
G879557 NA non-coding upstream 26073 32448953 ~ 32452117 (-)
G879580 NA non-coding upstream 99359 32522239 ~ 32522461 (-)
G879619 NA non-coding upstream 168585 32591465 ~ 32595689 (-)
G879622 NA non-coding upstream 178953 32601833 ~ 32602619 (-)
G879623 NA non-coding upstream 182771 32605651 ~ 32609567 (-)
G879440 LOC106603524 other downstream 142750 32225432 ~ 32225936 (-)
G878962 NA other downstream 919523 31447482 ~ 31449163 (-)
LOC110533621 NA other downstream 2452181 29906094 ~ 29922728 (-)
G875194 NA other downstream 3383616 28941240 ~ 28985070 (-)
G879617 NA other upstream 163011 32585891 ~ 32588838 (-)
G879763 NA other upstream 367487 32790367 ~ 32790802 (-)
G880718 LOC106603546 other upstream 613283 33036163 ~ 33037883 (-)
LOC110533673 NA other upstream 731090 33153970 ~ 33251521 (-)
G880807 NA other upstream 740032 33162912 ~ 33165022 (-)

Expression


Co-expression Network