G1015524


Basic Information

Item Value
gene id G1015524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 73362451 ~ 73362664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1155059
ctcactcactcattcatttaTTCTGGGAGAACATACGGACAAACCTTTCACTACGATTGACAGTGGGTCGCTGTAACGTTACAGGCATACAGTCTTGTGATTCATTCCATTTCCATTTGGCTAGCTAGTCTGACACCAAAGCCAGTCAAATAAGCTAATGTACTTCAAAATTGTCACGGGTCAATAATGTACGGACATTAGAAGCATGTATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1155059 True 214 lncRNA 0.41 1 73362451 73362664

Neighbor

gene id symbol gene type direction distance location
hscb LOC106579811 coding upstream 65165 73283122 ~ 73297286 (+)
LOC110535110 LOC106579812 coding upstream 107659 73155366 ~ 73254792 (+)
LOC110536365 LOC106579797 coding upstream 440642 72891245 ~ 72921809 (+)
LOC110536364 NA coding upstream 487862 72872990 ~ 72877719 (+)
LOC110535108 LOC106580629 coding upstream 608049 72713990 ~ 72754402 (+)
LOC110536373 LOC106579808 coding downstream 586908 73949572 ~ 73982959 (+)
selenoe fep15 coding downstream 638723 74001387 ~ 74005603 (+)
zgc:112294 LOC106579817 coding downstream 645089 74007753 ~ 74011243 (+)
LOC110536376 fbxo21 coding downstream 875060 74237724 ~ 74251184 (+)
LOC110536377 tesc coding downstream 888757 74251421 ~ 74262706 (+)
G1015492 NA non-coding upstream 21995 73340107 ~ 73340456 (+)
G1015483 NA non-coding upstream 30426 73331805 ~ 73332025 (+)
G1015324 NA non-coding upstream 142829 73219300 ~ 73219622 (+)
G1015323 NA non-coding upstream 145439 73216774 ~ 73217012 (+)
G1015321 NA non-coding upstream 146931 73215314 ~ 73215520 (+)
G1015526 NA non-coding downstream 4340 73367004 ~ 73367212 (+)
G1015530 NA non-coding downstream 6761 73369425 ~ 73369639 (+)
G1015540 NA non-coding downstream 16247 73378911 ~ 73379189 (+)
G1015545 NA non-coding downstream 20726 73383390 ~ 73383748 (+)
G1015598 NA non-coding downstream 91725 73454389 ~ 73454782 (+)
G1014834 NA other upstream 601506 72760521 ~ 72760945 (+)
G1013922 NA other upstream 1482779 71879296 ~ 71879672 (+)
G1013617 NA other upstream 1521981 71838302 ~ 71840882 (+)
LOC110536353 LOC106580623 other upstream 1565136 71738585 ~ 71797315 (+)
G1017593 NA other downstream 1937674 75269723 ~ 75328737 (+)
LOC110536406 LOC106570821 other downstream 3125844 76396096 ~ 76600566 (+)
G1018678 NA other downstream 3161474 76524138 ~ 76525567 (+)
G1019189 ptar1 other downstream 3455841 76818505 ~ 76821968 (+)
mamdc2a LOC106570826 other downstream 3527063 76889699 ~ 76939449 (+)

Expression


Co-expression Network