G1019189 (ptar1)


Basic Information

Item Value
gene id G1019189
gene name ptar1
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 76818505 ~ 76821968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1159236
TGTCGAGTCAATAAGATATTTATGGGATAGCTAGACTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCCAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTTGTTAGCCAACAAAAGCTAACACAGTCACATCAATCAGCTGAAATGATAAACTAGGTGCACTTTCATTGGTTTCAACTTTGTTTATATTGGCATATCTTTGGATATATTAATTTTAAATAGTCATGATAAATTCATTTGCCCTGGATCAGAGAAGCAGTCAGTCTCGTCACGTTCATATATGCGTGACACGGTGGAGATCACAAAAAAACTGCAACATGTTGCACAAGTCAGATAGTCACACAGCGAGACTTAGCTATTACCCCGCTGTACCCAAACCAATGCTAGGCTAGTAGCATGGGGAAATATTGTCTAGACGCTTTTTTCGAAGGTTGATTGACTGGCTGGGCTGACCATGTAATAGAAACCATTATGATCTAAGGGCCAAACTGATCCTATATAAAGGACTCGGAATATAACACTTTGTGAATACAATCCCAggtatcattgactctgtaccctgtatatagcctcgttattgttattttgtgttacttgtattattttttactttagtttatttggtaaatattttcttaactcgttcttgaactgcactgttggttaagggcttgtaagtaagcatttcacagtaaggtctaaacctgttgtattcggcgcatgtgactgataaagtttgatttgatcactAAGAGTAAGTACCACTAACAGGGTGAAATAGAACAGACAGAAACAAAGCAGCAACCACTCCTGGAAAGTCAATAGGATgcctcccaaatgacaccctattctctatatagtgcactacttttaaccagagccctatgggtagtactGCACGaagaagggaatagggtgccatttgggacacaaaacAATGAAGATCAAACCTATAAGGGCAATTCCACAGCAGCAGGagtgtgaaatgttttttttggtaTCTCAGATTGGTCTCACTTCCTCCCAGTGGAGTTCCTATGTATGTTTATTAACATTTGTatcaaaccatttttttttttagaaaatcaGGATGAAATTTAATTGAATAAGGCCCTTTTTAGACttatacatgcctcctgtaagaaCCTATGATGTGTGAACCGTACACGATACAGACATCTTGGTGTCGTTATAGTCCTTCGTGTtctgaaatacacattttcacattcatttattcaacataAAAAATATTAATCTCAACTACCCttattgattttttttaacaATATACTCTTCAAACATCACATTTCCAGAGTTGGATCTCTGGTACTTTTCATAATATGACCCATTTTACACAGAAATTGACATTGGTCATGAACCAATCACAGCCCTTCTTTAGGATTGCACATTCAGCAAGTCACCAGCAGAGGGCGTTCCCTTTGAATCCATTTCCCATTCAATGTGCTGGTGGTGATAATAACATTGCTAAATTTGAAGGTATGATCAgagagcccactctggaaatgtgaTGTACTAGTAGAGTATATTGTTCCAAACACATGaactaaaaaaataaacaataattACAAGGGGATAGTTtatgttgaataaatgaatgtgaaAATTGTATTTCAGAATCTAGTCATACTCCATATTTTAGAGCACACTATAAGGTTTATTAGGATGACACCAAGATGGCTAACTTGTACGGTTCACGGATCATAGGGTCTTAGAGTTTGGTTGGTTCATGATTGTGCTCTGTCTTAAGGTTTTATAGTTGTACGGTTGTCCGTAGCGACACATCAGTAATGGCTTGACTAGTTTTTCCTTCTTTGTTTTTGTATGTTGACAATTCATTATTTGCTGCACTGCTCATCTCAAAGTAAGTCAGCAGAACTGACTAGAAAACGACAAGATTAGTGATGGATAACCATGGCAGCTTCACATAGGCTATTCTTCTACAGTTAGTGGGAGAACAAAAGGAATGACACGATGAATGAAACCGAGACATGGATCTCATAAGGGAAACAACTAAAAGGACTGACAGAATGGTTGTTCTAGTCCCTAACATTGAGAGAGACCTGAACTACAAACAGGCCAAGGTGACACACTGTACTATTCCAGAGAAAAGCCCTTCTCAGATATCCATCCCCAGACAAAGCTCTGCGGATGAATCAGAGTCCAGGCATTTTTGGGAGGGGCCACAAATTACTTGACCTATCAGAGACCCCAGCCCCCTTCACGAGTATTGAAGAATAGGATGAATTGACCAGCCACTAGACGCTGATCTAGGGACAGTTCTTAGTAGTTCTCgccctaatggttaaggttaggggttgtGTAAGGGTGAGAGGATGCTAGATCTGTGCAGGTGGGCAACTTCTAACCGCTGCCCATCTCCGGTGGAACAGGAAGTATATCCTCTCACTGACCAATGACAGAGTCAGTCTATATCTCACTGACCAATAACAGAGTCCAACCACTTCCTGTATGCGAGGGCGAAGCGTCCCTGCTCAGGGGAGCGGCAGCTGTCCAGGACACTGGCTACGAAGCTGTGCTCTGAGGGAAGAGCAGGGGGGCAGGGGCCAGGGGGACCCCTCTTCAGGCGCTTGGTGTCACGGGGGTCCGGGACCCCAACCCCGTCCACTTCCATGGCATCCTGACCCTCCTGAGCCTGTCCATTCCTGCGCTGCACCCTGTCTAGACCCACACCTCCAGGGCAGGCCGTGTGAGGGTGGCTGCTCAGCCCAGCATCGGTGTGGTTCGGTTGGGGAGACTCGCTGCCGAAGCCCTGGCCGTAGTGGTGGTCCCTCCTCCAGTGGTGCCAGAGGTAGAAGACGT
>TU1159237
TGTCGAGTCAATAAGATATTTATGGGATAGCTAGACTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCCAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTTGTTAGCCAACAAAAGCTAACACAGTCACATCAATCAGCTGAAATGATAAACTAGGTGCACTTTCATTGGTTTCAACTTTGTTTATATTGGCATATCTTTGGATATATTAATTTTAAATAGTCATGATAAATTCATTTGCCCTGGATCAGAGAAGCAGTCAGTCTCGTCACGTTCATATATGCGTGACACGGTGGAGATCACAAAAAAACTGCAACATGTTGCACAAGTCAGATAGTCACACAGCGAGACTTAGCTATTACCCCGCTGTACCCAAACCAATGCTAGGCTAGTAGCATGGGGAAATATTGTCTAGACGCTTTTTTCGAAGGTTGATTGACTGGCTGGGCTGACCATGTAATAGAAACCATTATGATCTAAGGGCCAAACTGATCCTATATAAAGGACTCGGAATATAACACTTTGTGAATACAATCCCAggtatcattgactctgtaccctgtatatagcctcgttattgttattttgtgttacttgtattattttttactttagtttatttggtaaatattttcttaactcgttcttgaactgcactgttggttaagggcttgtaagtaagcatttcacagtaaggtctaaacctgttgtattcggcgcatgtgactgataaagtttgatttgatcactAAGAGTAAGTACCACTAACAGGGTGAAATAGAACAGACAGAAACAAAGCAGCAACCACTCCTGGAAAGTCAATAGGATgcctcccaaatgacaccctattctctatatagtgcactacttttaaccagagccctatgggtagtactGCACGaagaagggaatagggtgccatttgggacacaaaacAATGAAGATCAAACCTATAAGGGCAATTCCACAGCAGCAGGagtgtgaaatgttttttttggtaTCTCAGATTGGTCTCACTTCCTCCCAGTGGAGTTCCTATGTATGTTTATTAACATTTGTatcaaaccatttttttttttagaaaatcaGGATGAAATTTAATTGAATAAGGCCCTTTTTAGACttatacatgcctcctgtaagaaCCTATGATGTGTGAACCGTACACGATACAGACATCTTGGTGTCGTTATAGTCCTTCGTGTtctgaaatacacattttcacattcatttattcaacataAAAAATATTAATCTCAACTACCCttattgattttttttaacaATATACTCTTCAAACATCACATTTCCAGAGTTGGATCTCTGGTACTTTTCATAATATGACCCATTTTACACAGAAATTGACATTGGTCATGAACCAATCACAGCCCTTCTTTAGGATTGCACATTCAGCAAGTCACCAGCAGAGGGCGTTCCCTTTGAATCCATTTCCCATTCAATGTGCTGGTGGTGATAATAACATTGCTAAATTTGAAGGTATGATCAgagagcccactctggaaatgtgaTGTACTAGTAGAGTATATTGTTCCAAACACATGaactaaaaaaataaacaataattACAAGGGGATAGTTtatgttgaataaatgaatgtgaaAATTGTATTTCAGAATCTAGTCATACTCCATATTTTAGAGCACACTATAAGGTTTATTAGGATGACACCAAGATGGCTAACTTGTACGGTTCACGGATCATAGGGTCTTAGAGTTTGGTTGGTTCATGATTGTGCTCTGTCTTAAGGTTTTATAGTTGTACGGTTGTCCGTAGCGACACATCAGTAATGGCTTGACTAGTTTTTCCTTCTTTGTTTTTGTATGTTGACAATTCATTATTTGCTGCACTGCTCATCTCAAAGTAAGTCAGCAGAACTGACTAGAAAACGACAAGATTAGTGATGGATAACCATGGCAGCTTCACATAGGCTATTCTTCTACAGTTAGTGGGAGAACAAAAGGAATGACACGATGAATGAAACCGAGACATGGATCTCATAAGGGAAACAACTAAAAGGACTGACAGAATGGTTGTTCTAGTCCCTAACATTGAGAGAGACCTGAACTACAAACAGGCCAAGGTGACACACTGTACTATTCCAGAGAAAAGCCCTTCTCAGATATCCATCCCCAGACAAAGCTCTGCGGATGAATCAGAGTCCAGGCATTTTTGGGAGGGGCCACAAATTACTTGACCTATCAGAGACCCCAGCCCCCTTCACGAGTATTGAAGAATAGGATGAATTGACCAGCCACTAGACGCTGATCTAGGGACAGTTCTTAGTAGTTCTCgccctaatggttaaggttaggggttgtGTAAGGGTGAGAGGATGCTAGATCTGTGCAGGTGGGCAACTTCTAACCGCTGCCCATCTCCGGTGGAACAGGAAGTATATCCTCTCACTGACCAATGACAGAGTCAGTCTATATCTCACTGACCAATAACAGAGTCCAACCACTTCCTGTATGCGAGGGCGAAGCGTCCCTGCTCAGGGGAGCGGCAGCTGTCCAGGACACTGGCTACGAAGCTGTGCTCTGAGGGAAGAGCAGGGGGGCAGGGGCCAGGGGGACCCCTCTTCAGGCGCTTGGTGTCACGGGGGTCCGGGACCCCAACCCCGTCCACTTCCATGGCATCCTGACCCTCCTGAGCCTGTCCATTCCTGCGCTGCACCCTGTCTAGACCCACACCTCCAGGGCAGGCCGTGTGAGGGTGGCTGCTCAGCCCAGCATCGGTGTGGTTCGGTTGGGGAGACTCGCTGCCGAAGCCCTGGCCGTAGTGGTGGTCCCTCCTCCAGTGGTGCCAGAGGTAGAAGACGTGTCGCCTTGAGAAGATAGTTGTTATGAAATACTGCATGAGCATTAGACTGGAATCATGTCAATGTGAACCAGTACGCTACACTGCAAAGCCTTGAGGGtgctttattatttatttatctgtaCGGAATGAGAagcttaaaaaataaataagcacTTGATGTTTTTAAAGGGGGAAAAGATACAAAATGATGTAGGCTAAAAAACAATATCCTTATTAATAAAGTATTTGAGGAAGAGCACAACTGTTGTGATCTATACGTGTCTCACACATTCAACAAGGATGTGAACACTGTTGCCATGGCACCACTCACTTCTCCCTATCACAACAAAGCTGGTCAGGATAAACACTTGACTGTGCAGCTGGTCTTTAGCCTCGGGGCaaaacatctctctccctccctctcatctaccttct
>TU1159238
TGTCGAGTCAATAAGATATTTATGGGATAGCTAGACTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCCAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTATGGGATAGCTAGGCTAACGTTACTTCTCCTTTGTTAGCCAACAAAAGCTAACACAGTCACATCAATCAGCTGAAATGATAAACTAGGTGCACTTTCATTGGTTTCAACTTTGTTTATATTGGCATATCTTTGGATATATTAATTTTAAATAGTCATGATAAATTCATTTGCCCTGGATCAGAGAAGCAGTCAGTCTCGTCACGTTCATATATGCGTGACACGGTGGAGATCACAAAAAAACTGCAACATGTTGCACAAGTCAGATAGTCACACAGCGAGACTTAGCTATTACCCCGCTGTACCCAAACCAATGCTAGGCTAGTAGCATGGGGAAATATTGTCTAGACGCTTTTTTCGAAGGTTGATTGACTGGCTGGGCTGACCATGTAATAGAAACCATTATGATCTAAGGGCCAAACTGATCCTATATAAAGGACTCGGAATATAACACTTTGTGAATACAATCCCAggtatcattgactctgtaccctgtatatagcctcgttattgttattttgtgttacttgtattattttttactttagtttatttggtaaatattttcttaactcgttcttgaactgcactgttggttaagggcttgtaagtaagcatttcacagtaaggtctaaacctgttgtattcggcgcatgtgactgataaagtttgatttgatcactAAGAGTAAGTACCACTAACAGGGTGAAATAGAACAGACAGAAACAAAGCAGCAACCACTCCTGGAAAGTCAATAGGATgcctcccaaatgacaccctattctctatatagtgcactacttttaaccagagccctatgggtagtactGCACGaagaagggaatagggtgccatttgggacacaaaacAATGAAGATCAAACCTATAAGGGCAATTCCACAGCAGCAGGagtgtgaaatgttttttttggtaTCTCAGATTGGTCTCACTTCCTCCCAGTGGAGTTCCTATGTATGTTTATTAACATTTGTatcaaaccatttttttttttagaaaatcaGGATGAAATTTAATTGAATAAGGCCCTTTTTAGACttatacatgcctcctgtaagaaCCTATGATGTGTGAACCGTACACGATACAGACATCTTGGTGTCGTTATAGTCCTTCGTGTtctgaaatacacattttcacattcatttattcaacataAAAAATATTAATCTCAACTACCCttattgattttttttaacaATATACTCTTCAAACATCACATTTCCAGAGTTGGATCTCTGGTACTTTTCATAATATGACCCATTTTACACAGAAATTGACATTGGTCATGAACCAATCACAGCCCTTCTTTAGGATTGCACATTCAGCAAGTCACCAGCAGAGGGCGTTCCCTTTGAATCCATTTCCCATTCAATGTGCTGGTGGTGATAATAACATTGCTAAATTTGAAGGTATGATCAgagagcccactctggaaatgtgaTGTACTAGTAGAGTATATTGTTCCAAACACATGaactaaaaaaataaacaataattACAAGGGGATAGTTtatgttgaataaatgaatgtgaaAATTGTATTTCAGAATCTAGTCATACTCCATATTTTAGAGCACACTATAAGGTTTATTAGGATGACACCAAGATGGCTAACTTGTACGGTTCACGGATCATAGGGTCTTAGAGTTTGGTTGGTTCATGATTGTGCTCTGTCTTAAGGTTTTATAGTTGTACGGTTGTCCGTAGCGACACATCAGTAATGGCTTGACTAGTTTTTCCTTCTTTGTTTTTGTATGTTGACAATTCATTATTTGCTGCACTGCTCATCTCAAAGTAAGTCAGCAGAACTGACTAGAAAACGACAAGATTAGTGATGGATAACCATGGCAGCTTCACATAGGCTATTCTTCTACAGTTAGTGGGAGAACAAAAGGAATGACACGATGAATGAAACCGAGACATGGATCTCATAAGGGAAACAACTAAAAGGACTGACAGAATGGTTGTTCTAGTCCCTAACATTGAGAGAGACCTGAACTACAAACAGGCCAAGGTGACACACTGTACTATTCCAGAGAAAAGCCCTTCTCAGATATCCATCCCCAGACAAAGCTCTGCGGATGAATCAGAGTCCAGGCATTTTTGGGAGGGGCCACAAATTACTTGACCTATCAGAGACCCCAGCCCCCTTCACGAGTATTGAAGAATAGGATGAATTGACCAGCCACTAGACGCTGATCTAGGGACAGTTCTTAGTAGTTCTCgccctaatggttaaggttaggggttgtGTAAGGGTGAGAGGATGCTAGATCTGTGCAGGTGGGCAACTTCTAACCGCTGCCCATCTCCGGTGGAACAGGAAGTATATCCTCTCACTGACCAATGACAGAGTCAGTCTATATCTCACTGACCAATAACAGAGTCCAACCACTTCCTGTATGCGAGGGCGAAGCGTCCCTGCTCAGGGGAGCGGCAGCTGTCCAGGACACTGGCTACGAAGCTGTGCTCTGAGGGAAGAGCAGGGGGGCAGGGGCCAGGGGGACCCCTCTTCAGGCGCTTGGTGTCACGGGGGTCCGGGACCCCAACCCCGTCCACTTCCATGGCATCCTGACCCTCCTGAGCCTGTCCATTCCTGCGCTGCACCCTGTCTAGACCCACACCTCCAGGGCAGGCCGTGTGAGGGTGGCTGCTCAGCCCAGCATCGGTGTGGTTCGGTTGGGGAGACTCGCTGCCGAAGCCCTGGCCGTAGTGGTGGTCCCTCCTCCAGTGGTGCCAGAGGTAGAAGACGTGTCGCCTTGAGAAGATAGTTGTTATGAAATACTGCATGAGCATTAGACTGGAATCATGTCAATGTGAACCAGTACGCTACACTGCAAAGCCTTGAGGGtgctttattatt

Function

symbol description
ptar1 Predicted to enable protein prenyltransferase activity. Predicted to act upstream of or within protein prenylation. Orthologous to human PTAR1 (protein prenyltransferase alpha subunit repeat containing 1).

NR:

description
protein prenyltransferase alpha subunit repeat-containing protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1159236 False 3049 TUCP 0.43 1 76818505 76821553
TU1159237 False 3464 TUCP 0.42 1 76818505 76821968
TU1159238 True 3159 TUCP 0.43 1 76818505 76821663

Neighbor

gene id symbol gene type direction distance location
LOC118937404 LOC106570822 coding upstream 156278 76617410 ~ 76662227 (+)
LOC110536406 LOC106570821 coding upstream 217939 76396096 ~ 76600566 (+)
fxn LOC100194686 coding upstream 433927 76371045 ~ 76384578 (+)
LOC110536397 LOC106570810 coding upstream 664785 76150401 ~ 76153720 (+)
LOC110535118 LOC106570809 coding upstream 687381 76110124 ~ 76131124 (+)
LOC110536409 LOC106570807 coding downstream 27006 76848974 ~ 76856364 (+)
mamdc2a LOC106570826 coding downstream 67731 76889699 ~ 76939449 (+)
slc39a14 slc39a14 coding downstream 121752 76943720 ~ 76991807 (+)
LOC110536652 NA coding downstream 187602 77009570 ~ 77010847 (+)
LOC110536412 LOC106570827 coding downstream 193479 77015447 ~ 77035436 (+)
G1019184 NA non-coding upstream 1948 76816204 ~ 76816557 (+)
G1019178 NA non-coding upstream 10063 76808219 ~ 76808442 (+)
G1019173 NA non-coding upstream 12179 76806022 ~ 76806326 (+)
G1018841 NA non-coding upstream 17412 76800712 ~ 76801093 (+)
G1018836 NA non-coding upstream 34059 76784202 ~ 76784446 (+)
G1019193 NA non-coding downstream 4989 76826957 ~ 76869109 (+)
G1019226 NA non-coding downstream 56138 76878106 ~ 76880791 (+)
G1019242 NA non-coding downstream 82111 76904079 ~ 76907220 (+)
G1019246 NA non-coding downstream 94970 76916938 ~ 76920807 (+)
G1019251 NA non-coding downstream 115262 76937230 ~ 76937615 (+)
G1018678 NA other upstream 292938 76524138 ~ 76525567 (+)
G1017593 NA other upstream 1489768 75269723 ~ 75328737 (+)
LOC110535110 LOC106579812 other upstream 3650063 73155366 ~ 73254792 (+)
G1014834 NA other upstream 4057560 72760521 ~ 72760945 (+)
LOC110536414 NA other downstream 311923 77131426 ~ 77139724 (+)
LOC110536420 NA other downstream 586061 77407991 ~ 77410527 (+)
G1019753 NA other downstream 646261 77468229 ~ 77469925 (+)
G1019804 fam151b other downstream 794362 77605155 ~ 77618204 (+)

Expression


Co-expression Network