Gene
RNA
| Item | Value |
|---|---|
| gene id | G1018815 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 76749112 ~ 76749372 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1158787 | True | 212 | lncRNA | 0.52 | 2 | 76749112 | 76749372 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937404 | LOC106570822 | coding | upstream | 86885 | 76617410 ~ 76662227 (+) |
| LOC110536406 | LOC106570821 | coding | upstream | 148546 | 76396096 ~ 76600566 (+) |
| fxn | LOC100194686 | coding | upstream | 364534 | 76371045 ~ 76384578 (+) |
| LOC110536397 | LOC106570810 | coding | upstream | 595392 | 76150401 ~ 76153720 (+) |
| LOC110535118 | LOC106570809 | coding | upstream | 617988 | 76110124 ~ 76131124 (+) |
| LOC110536409 | LOC106570807 | coding | downstream | 99602 | 76848974 ~ 76856364 (+) |
| mamdc2a | LOC106570826 | coding | downstream | 140327 | 76889699 ~ 76939449 (+) |
| slc39a14 | slc39a14 | coding | downstream | 194348 | 76943720 ~ 76991807 (+) |
| LOC110536652 | NA | coding | downstream | 260198 | 77009570 ~ 77010847 (+) |
| LOC110536412 | LOC106570827 | coding | downstream | 266075 | 77015447 ~ 77035436 (+) |
| G1018764 | NA | non-coding | upstream | 3643 | 76662638 ~ 76745469 (+) |
| G1018812 | NA | non-coding | upstream | 4808 | 76743919 ~ 76744304 (+) |
| G1018797 | NA | non-coding | upstream | 56407 | 76688667 ~ 76692705 (+) |
| G1018792 | apba1 | non-coding | upstream | 69985 | 76678704 ~ 76679127 (+) |
| G1018781 | NA | non-coding | upstream | 95307 | 76653416 ~ 76653805 (+) |
| G1018818 | NA | non-coding | downstream | 6349 | 76755721 ~ 76755949 (+) |
| G1018820 | NA | non-coding | downstream | 7987 | 76757359 ~ 76757758 (+) |
| G1018824 | NA | non-coding | downstream | 16212 | 76765584 ~ 76765894 (+) |
| G1018830 | NA | non-coding | downstream | 23967 | 76773339 ~ 76773547 (+) |
| G1018831 | NA | non-coding | downstream | 24277 | 76773649 ~ 76774187 (+) |
| G1018678 | NA | other | upstream | 223545 | 76524138 ~ 76525567 (+) |
| G1017593 | NA | other | upstream | 1420375 | 75269723 ~ 75328737 (+) |
| LOC110535110 | LOC106579812 | other | upstream | 3580670 | 73155366 ~ 73254792 (+) |
| G1014834 | NA | other | upstream | 3988167 | 72760521 ~ 72760945 (+) |
| G1019189 | ptar1 | other | downstream | 69133 | 76818505 ~ 76821968 (+) |
| LOC110536414 | NA | other | downstream | 384519 | 77131426 ~ 77139724 (+) |
| LOC110536420 | NA | other | downstream | 658657 | 77407991 ~ 77410527 (+) |
| G1019753 | NA | other | downstream | 718857 | 77468229 ~ 77469925 (+) |
