G1081587


Basic Information

Item Value
gene id G1081587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 48918100 ~ 48918635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1230908
tatggactggcccgcccattccccaaacctgaatccaatttagcacatctgggacatcatgtctcgctccatccaccaacgccacgttgcaccacagactgtccaggagttggcggatgctttagtccaggtctgggaggagatccctcaggagaccatccgccacctcatcaggaacatgcccaggcgttgtagggaggtcatacaggcacatggaggccacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggttttccactgtaattttgagtgtgactccaaatccagacctccttgggttgatacatttgatttccattgatcatttttgtgtgattttgttgtcagcacattcaactatgtaaagaaaaaagtatttaataagactattacattcattcagatctaggatgtgttatttgagtgttccctttatttttttgagcagtgtatgttttTTGGAaagtatacttaagtatattttctTAGGATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1230908 True 536 lncRNA 0.43 1 48918100 48918635

Neighbor

gene id symbol gene type direction distance location
LOC110537709 LOC106567546 coding upstream 12821 48781287 ~ 48905279 (+)
LOC110538905 LOC106567547 coding upstream 335400 48281750 ~ 48582700 (+)
LOC110537708 LOC106567614 coding upstream 926644 47988095 ~ 47991456 (+)
LOC110537707 NA coding upstream 942234 47952857 ~ 47975866 (+)
LOC110537705 LOC106567550 coding upstream 1035785 47869876 ~ 47882315 (+)
LOC110537710 LOC106567545 coding downstream 4269 48922904 ~ 49098526 (+)
LOC110537711 LOC106567544 coding downstream 193693 49112328 ~ 49141086 (+)
LOC110537712 LOC106567543 coding downstream 248914 49167549 ~ 49209751 (+)
LOC110537713 LOC106567542 coding downstream 343507 49262142 ~ 49300347 (+)
tmem126a tmem126a coding downstream 754452 49673087 ~ 49674977 (+)
G1081582 NA non-coding upstream 2438 48915267 ~ 48915662 (+)
G1081579 NA non-coding upstream 4149 48913684 ~ 48913951 (+)
G1081474 NA non-coding upstream 22798 48895018 ~ 48895302 (+)
G1081473 NA non-coding upstream 23466 48894395 ~ 48894634 (+)
G1081470 NA non-coding upstream 25223 48892670 ~ 48892877 (+)
G1081595 NA non-coding downstream 3645 48922280 ~ 48922499 (+)
G1081664 NA non-coding downstream 44606 48963241 ~ 48963460 (+)
G1081671 LOC100136012 non-coding downstream 55879 48974514 ~ 48974996 (+)
G1081681 NA non-coding downstream 68109 48986744 ~ 48987019 (+)
G1081353 NA other upstream 170601 48746955 ~ 48747499 (+)
G1077322 NA other upstream 2909491 46004151 ~ 46008609 (+)
nrgna NA other upstream 2997839 45900621 ~ 45920265 (+)
G1077158 NA other upstream 3304335 45611545 ~ 45613765 (+)
G1075958 NA other upstream 4442434 44473748 ~ 44475666 (+)
G1082266 NA other downstream 760388 49679023 ~ 49680804 (+)
G1086237 LOC106567502 other downstream 3730969 52649604 ~ 52657495 (+)
G1087914 NA other downstream 5191055 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 5355671 54253719 ~ 54283905 (+)

Expression


Co-expression Network