G1086409


Basic Information

Item Value
gene id G1086409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 52894569 ~ 52894887 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1236018
caatagCATCATTCATTTGACCAAGTACTAGGACATTTTagacaaaaacctggttgcctctgccaggaagCTGACACTTGGCAGCAAGTGGATCTTCcggcaagacaataaccccaagcacgaATCAAAATCCACAGAGAAATTGTTACTCGACCACAAAATCTAAATTtcgcaatggccatctcagtctccggacttgaaccccattggaaacctgtggtttgacttgaagagggcagtccataagcgcagacaaaggatatcaaggatctggaaagattctgtatggaggaatggtctaagatcatTGTGACCTGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1236018 True 319 lncRNA 0.45 1 52894569 52894887

Neighbor

gene id symbol gene type direction distance location
LOC110537765 LOC106567495 coding upstream 33297 52851651 ~ 52861272 (+)
endou2 LOC106567496 coding upstream 43244 52843119 ~ 52851325 (+)
LOC110537763 rnf14 coding upstream 51844 52836678 ~ 52842725 (+)
LOC110537762 LOC106567497 coding upstream 72772 52804227 ~ 52821797 (+)
LOC110537755 LOC106567504 coding upstream 662341 52164071 ~ 52232228 (+)
LOC110537768 LOC106567493 coding downstream 109942 53004829 ~ 53132925 (+)
LOC110537771 LOC106567489 coding downstream 435294 53330181 ~ 53419845 (+)
LOC110537774 NA coding downstream 767638 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 795417 53690304 ~ 53692630 (+)
LOC100301661 LOC106567454 coding downstream 906775 53801662 ~ 53804908 (+)
G1086404 NA non-coding upstream 9047 52885195 ~ 52885522 (+)
G1086400 NA non-coding upstream 14819 52879543 ~ 52879750 (+)
G1086390 NA non-coding upstream 24262 52870062 ~ 52870307 (+)
G1086381 NA non-coding upstream 46290 52848026 ~ 52848279 (+)
G1086161 NA non-coding upstream 350200 52544128 ~ 52544369 (+)
G1086412 NA non-coding downstream 4457 52899344 ~ 52899557 (+)
G1086413 NA non-coding downstream 5405 52900292 ~ 52900506 (+)
G1086420 NA non-coding downstream 13224 52908111 ~ 52908485 (+)
G1086421 LOC106567494 non-coding downstream 15412 52910299 ~ 52913405 (+)
G1086605 NA non-coding downstream 37237 52932124 ~ 52932407 (+)
G1086237 LOC106567502 other upstream 237074 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3213765 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 3594222 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4147070 48746955 ~ 48747499 (+)
G1077322 NA other upstream 6885960 46004151 ~ 46008609 (+)
G1087914 NA other downstream 1214803 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 1379419 54253719 ~ 54283905 (+)
G1091217 NA other downstream 3830720 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3857531 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 4220938 57112902 ~ 57118165 (+)

Expression


Co-expression Network