G1086605


Basic Information

Item Value
gene id G1086605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 52932124 ~ 52932407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1236235
gtgaagggcggctctggcagctcctgactgacgggtggctctggcagctcctgactgacgggcggctctggcaactcCTGACGGACGggtggagagacagcctggtgcgtggggctgccacaggaggcctggtgcgtggaggaggcactgGATGTGCCGGTCCGTGGAGgggcactggaggtctcgagcacccagcctgcacaacctgtcctggctggatactccctgtagcccggcaagtgcggcggggtggaacagaccgcactgggctgtgctggcgaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1236235 True 284 lncRNA 0.68 1 52932124 52932407

Neighbor

gene id symbol gene type direction distance location
LOC110537765 LOC106567495 coding upstream 70852 52851651 ~ 52861272 (+)
endou2 LOC106567496 coding upstream 80799 52843119 ~ 52851325 (+)
LOC110537763 rnf14 coding upstream 89399 52836678 ~ 52842725 (+)
LOC110537762 LOC106567497 coding upstream 110327 52804227 ~ 52821797 (+)
LOC110537755 LOC106567504 coding upstream 699896 52164071 ~ 52232228 (+)
LOC110537768 LOC106567493 coding downstream 72422 53004829 ~ 53132925 (+)
LOC110537771 LOC106567489 coding downstream 397774 53330181 ~ 53419845 (+)
LOC110537774 NA coding downstream 730118 53662525 ~ 53681131 (+)
LOC110537776 LOC106567605 coding downstream 757897 53690304 ~ 53692630 (+)
LOC100301661 LOC106567454 coding downstream 869255 53801662 ~ 53804908 (+)
G1086421 LOC106567494 non-coding upstream 18719 52910299 ~ 52913405 (+)
G1086420 NA non-coding upstream 23639 52908111 ~ 52908485 (+)
G1086413 NA non-coding upstream 31618 52900292 ~ 52900506 (+)
G1086412 NA non-coding upstream 32567 52899344 ~ 52899557 (+)
G1086409 NA non-coding upstream 37237 52894569 ~ 52894887 (+)
G1086622 NA non-coding downstream 13585 52945992 ~ 52946196 (+)
G1086633 NA non-coding downstream 22464 52954871 ~ 52955101 (+)
G1086635 NA non-coding downstream 22833 52955240 ~ 52955471 (+)
G1086649 NA non-coding downstream 33679 52966086 ~ 52966347 (+)
G1086704 NA non-coding downstream 69117 53001524 ~ 53001834 (+)
G1086237 LOC106567502 other upstream 274629 52649604 ~ 52657495 (+)
G1082266 NA other upstream 3251320 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 3631777 49262142 ~ 49300347 (+)
G1081353 NA other upstream 4184625 48746955 ~ 48747499 (+)
G1077322 NA other upstream 6923515 46004151 ~ 46008609 (+)
G1087914 NA other downstream 1177283 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 1341899 54253719 ~ 54283905 (+)
G1091217 NA other downstream 3793200 56725607 ~ 56726003 (+)
G1091235 NA other downstream 3820011 56752418 ~ 56752947 (+)
LOC110537831 dhx33 other downstream 4183418 57112902 ~ 57118165 (+)

Expression


Co-expression Network