Gene
RNA
| Item | Value |
|---|---|
| gene id | G1093425 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 58652159 ~ 58652382 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1243532 | True | 224 | lncRNA | 0.40 | 1 | 58652159 | 58652382 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rab28 | LOC106600633 | coding | upstream | 27702 | 58575601 ~ 58625910 (+) |
| LOC110538918 | nkx3-2 | coding | upstream | 105562 | 58545146 ~ 58546597 (+) |
| LOC110539153 | LOC106604490 | coding | upstream | 121940 | 58528290 ~ 58530219 (+) |
| LOC110537848 | sp30l | coding | upstream | 365531 | 58274018 ~ 58286628 (+) |
| LOC110537846 | ggnbp2 | coding | upstream | 379373 | 58225787 ~ 58272786 (+) |
| LOC110538919 | atp8a1 | coding | downstream | 38735 | 58691117 ~ 58827450 (+) |
| LOC110538920 | NA | coding | downstream | 198354 | 58850736 ~ 58873451 (+) |
| LOC110537867 | LOC106600640 | coding | downstream | 223019 | 58875401 ~ 58917409 (+) |
| LOC110537868 | LOC106600641 | coding | downstream | 283148 | 58935530 ~ 58959234 (+) |
| LOC110537870 | LOC100380866 | coding | downstream | 309385 | 58961767 ~ 58975136 (+) |
| G1093415 | NA | non-coding | upstream | 14017 | 58637821 ~ 58638142 (+) |
| G1093411 | NA | non-coding | upstream | 19341 | 58632588 ~ 58632818 (+) |
| G1093349 | NA | non-coding | upstream | 24994 | 58626825 ~ 58627165 (+) |
| G1093404 | NA | non-coding | upstream | 29252 | 58622662 ~ 58622907 (+) |
| G1093520 | NA | non-coding | downstream | 9203 | 58661585 ~ 58661852 (+) |
| G1093537 | NA | non-coding | downstream | 18028 | 58670410 ~ 58670715 (+) |
| G1093541 | NA | non-coding | downstream | 19960 | 58672342 ~ 58672552 (+) |
| G1093544 | NA | non-coding | downstream | 22197 | 58674579 ~ 58674807 (+) |
| LOC118937686 | NA | other | upstream | 429969 | 58216142 ~ 58222215 (+) |
| LOC110537841 | mtmr4 | other | upstream | 737327 | 57893341 ~ 58071571 (+) |
| LOC110537831 | dhx33 | other | upstream | 1534232 | 57112902 ~ 57118165 (+) |
| G1091235 | NA | other | upstream | 1899212 | 56752418 ~ 56752947 (+) |
| G1091217 | NA | other | upstream | 1926156 | 56725607 ~ 56726003 (+) |
| G1093909 | NA | other | downstream | 889176 | 59541558 ~ 59542603 (+) |
| G1094218 | LOC100380853 | other | downstream | 1378621 | 60031003 ~ 60034020 (+) |
| G1095244 | LOC108238713 | other | downstream | 1733282 | 60385664 ~ 60385973 (+) |
| LOC110539079 | LOC106600700 | other | downstream | 2044305 | 60696612 ~ 60777061 (+) |
| G1095209 | NA | other | downstream | 2164109 | 60816491 ~ 60818897 (+) |
