G1095413


Basic Information

Item Value
gene id G1095413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 60779263 ~ 60779496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1245781
GAAGAGCCCTCattgctgctcgatcatcctatttttccaacttaattgaggaaaataagaacaatccaacatttatttttgatactgtcgcaaagctaaatAAAAAGAggggatggctttcacttcagcagtgataaattcattaacttctttgaggaaaagatcacgATCATTAGAAAggaaattacggactcctctttaaatctgcgtattccaaagctcagttgtcctgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1245781 True 234 lncRNA 0.37 1 60779263 60779496

Neighbor

gene id symbol gene type direction distance location
LOC110539079 LOC106600700 coding upstream 2202 60696612 ~ 60777061 (+)
trpm4a LOC106600700 coding upstream 91148 60625595 ~ 60688115 (+)
scaf1 scaf1 coding upstream 183042 60576961 ~ 60596221 (+)
prr12b prr12 coding upstream 235234 60513247 ~ 60544029 (+)
prrg2 prrg2 coding upstream 267963 60501702 ~ 60511300 (+)
LOC110539110 LOC106600715 coding downstream 18745 60798241 ~ 60805113 (+)
LOC110539099 nosip coding downstream 29483 60808979 ~ 60813429 (+)
LOC110538924 LOC106600724 coding downstream 47948 60827444 ~ 60832100 (+)
LOC118937692 NA coding downstream 63195 60842691 ~ 60844148 (+)
bcl2l12 bcl2l12 coding downstream 106575 60886071 ~ 60893424 (+)
G1095340 NA non-coding upstream 202609 60576422 ~ 60576654 (+)
G1095335 NA non-coding upstream 209418 60569605 ~ 60569845 (+)
G1095333 NA non-coding upstream 210911 60568081 ~ 60568352 (+)
G1095332 NA non-coding upstream 211195 60567838 ~ 60568068 (+)
G1095329 NA non-coding upstream 213018 60566017 ~ 60566245 (+)
G1095438 NA non-coding downstream 45221 60824717 ~ 60824999 (+)
G1095440 NA non-coding downstream 54778 60834274 ~ 60834565 (+)
G1095449 NA non-coding downstream 72948 60852444 ~ 60854828 (+)
G1095460 NA non-coding downstream 126843 60906339 ~ 60911659 (+)
G1095462 NA non-coding downstream 132395 60911891 ~ 60912104 (+)
G1095244 LOC108238713 other upstream 393290 60385664 ~ 60385973 (+)
G1094218 LOC100380853 other upstream 745243 60031003 ~ 60034020 (+)
G1093909 NA other upstream 1236660 59541558 ~ 59542603 (+)
LOC118937686 NA other upstream 2557073 58216142 ~ 58222215 (+)
G1095209 NA other downstream 36995 60816491 ~ 60818897 (+)
mmp25a LOC106600705 other downstream 175204 60931123 ~ 60965921 (+)
G1095540 NA other downstream 258243 61037739 ~ 61352345 (+)
LOC118937701 LOC100136295 other downstream 1667008 62441706 ~ 62448515 (+)
LOC100305204 hebp2 other downstream 2522995 63302491 ~ 63334694 (+)

Expression


Co-expression Network