G1095883


Basic Information

Item Value
gene id G1095883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 61848076 ~ 61849280 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1246329
tgtattaaaaaaacagaaataccttatttgcataagtattcagtccctttgctataagactcaaaattgagcacaggtgcatcctgtttccattgatgtttctacatcttggagtccacctgtgataaattcaattgattggacatgatttggaaaggctcacacttgtctatataaggtcccacagttcacagtgcatgtcagagcaaaaaccaagccttgaggtcaaaggaattgtccgtagagcaaaaggtgcttcaacaaagtactgagtaaagggttggaatacttatttaaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1246329 True 301 lncRNA 0.38 2 61848076 61849280

Neighbor

gene id symbol gene type direction distance location
LOC110537918 NA coding upstream 11743 61835185 ~ 61836333 (+)
atxn2l atxn2l coding upstream 14475 61813631 ~ 61833601 (+)
sh2b1 sh2b1 coding upstream 34620 61794146 ~ 61813456 (+)
LOC110537916 LOC106600735 coding upstream 75344 61768417 ~ 61772732 (+)
atp2a1 atp2a1 coding upstream 94756 61724768 ~ 61753320 (+)
nupr1b LOC106600745 coding downstream 45467 61894747 ~ 61896190 (+)
doc2a LOC106600746 coding downstream 103010 61952290 ~ 62003086 (+)
LOC110537935 LOC106600756 coding downstream 321359 62170639 ~ 62185966 (+)
zgc:193811 LOC106600757 coding downstream 352070 62201350 ~ 62205293 (+)
kcnc3a LOC106600760 coding downstream 388724 62238004 ~ 62342939 (+)
G1095867 NA non-coding upstream 31367 61816420 ~ 61816709 (+)
G1095866 NA non-coding upstream 40299 61807473 ~ 61807777 (+)
G1095825 NA non-coding upstream 130436 61717368 ~ 61717640 (+)
G1095792 NA non-coding upstream 170495 61636020 ~ 61677581 (+)
G1095893 NA non-coding downstream 28891 61878171 ~ 61878429 (+)
G1095894 NA non-coding downstream 30031 61879311 ~ 61879618 (+)
G1095895 NA non-coding downstream 30584 61879864 ~ 61880367 (+)
G1095900 NA non-coding downstream 43376 61892656 ~ 61892998 (+)
G1095540 NA other upstream 495731 61037739 ~ 61352345 (+)
mmp25a LOC106600705 other upstream 882481 60931123 ~ 60965921 (+)
G1095209 NA other upstream 1029179 60816491 ~ 60818897 (+)
LOC110539079 LOC106600700 other upstream 1134064 60696612 ~ 60777061 (+)
G1095244 LOC108238713 other upstream 1462103 60385664 ~ 60385973 (+)
LOC118937701 LOC100136295 other downstream 597224 62441706 ~ 62448515 (+)
LOC100305204 hebp2 other downstream 1453211 63302491 ~ 63334694 (+)
LOC110538933 LOC106600901 other downstream 2038816 63888086 ~ 63908673 (+)
G1097063 NA other downstream 2287078 64136358 ~ 64136704 (+)
G1097116 NA other downstream 2378721 64228001 ~ 64228684 (+)

Expression


Co-expression Network