XLOC_029833 (CU856358.1)


Basic Information

Item Value
gene id XLOC_029833
gene name CU856358.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 6722310 ~ 6728953 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058516
TGACTCCAGCGTAGGCACGTGCACGTTTTTGACAGGAATGGCGGGAGTTTCAGATACACAGCTGAGTCGGAGTCTTCATCATCGAGATACTCCTCGGCGTTACTGTGGGTGCGCAGAATGACTGGAGACGGGACAGAAGGACGGTTAAATGGGTGACTACAGGAAGTGACATGTGATTGAGGTACTGTAACTGAAAGGAGACGCCTTATGACTCACCTCCTCCCAGCTTCCTCTTCAGCAGAGAGGCGCACTGTGCGTTGGTGGCCATATCCAGAGCCGTCTTCTTCTCATTGTTTACCACATCTGTCCTTGCATCtgtaaacacacagacatgatatgaaatattaaagataaaaaataaaataaaatcac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098525

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058516 True 372 lncRNA 0.47 2 6722310 6728953

Neighbor

gene id symbol gene type direction distance location
XLOC_029832 pxna coding upstream 4190 6670945 ~ 6718120 (+)
XLOC_029831 zgc:110796 coding upstream 102305 6617401 ~ 6620005 (+)
XLOC_029830 NA coding upstream 324384 6396274 ~ 6397926 (+)
XLOC_029829 unm_sa808 coding upstream 1026137 5689476 ~ 5696173 (+)
XLOC_029828 CABZ01075627.1 coding upstream 1106864 5615331 ~ 5615446 (+)
XLOC_029834 areg coding downstream 26513 6755466 ~ 6790840 (+)
XLOC_029835 me2 coding downstream 67338 6796291 ~ 6844306 (+)
XLOC_029836 elac1 coding downstream 125392 6854345 ~ 6864127 (+)
XLOC_029837 smad4b coding downstream 146319 6875272 ~ 6922168 (+)
XLOC_029838 CT955987.1 coding downstream 146967 6875920 ~ 6876034 (+)
XLOC_029826 CU929057.1 non-coding upstream 1370123 5352071 ~ 5352187 (+)
XLOC_029825 NA non-coding upstream 1396153 5242666 ~ 5326157 (+)
XLOC_029824 NA non-coding upstream 1550978 5163263 ~ 5171332 (+)
XLOC_029839 NA non-coding downstream 204109 6933062 ~ 6939709 (+)
XLOC_029842 NA non-coding downstream 310491 7039444 ~ 7106159 (+)
XLOC_029845 NA non-coding downstream 1186063 7915016 ~ 7919510 (+)
XLOC_029846 NA non-coding downstream 1257348 7986301 ~ 8000304 (+)

Expression


Co-expression Network