G1108041


Basic Information

Item Value
gene id G1108041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 72141675 ~ 72142014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1259815
cagtcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtaaattataagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagtttgttaacaagaaatttgtggagtggttgaaaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgtatgcctcATAAACAATGAAACATTATAACAAAGGGCTGCATTCATTTAAAAATTCACCATGACACCTTTGAAGCTTGTATTCTCTTATGTAATTCATTAGTGTCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1259815 True 340 lncRNA 0.34 1 72141675 72142014

Neighbor

gene id symbol gene type direction distance location
zfand2a LOC106601116 coding upstream 11601 72125212 ~ 72130074 (+)
micall2a LOC106601118 coding upstream 103791 72022539 ~ 72037884 (+)
LOC110538241 LOC106607115 coding upstream 122530 72016045 ~ 72019145 (+)
LOC110538240 LOC106607338 coding upstream 130815 71989879 ~ 72010860 (+)
tmem184a LOC106607336 coding upstream 176019 71948230 ~ 71965656 (+)
LOC110538247 LOC106601153 coding downstream 10152 72152166 ~ 72161329 (+)
trnat-cgu-3 NA coding downstream 87484 72229498 ~ 72229569 (+)
LOC110538251 z3h7a coding downstream 120307 72262321 ~ 72273102 (+)
LOC110538257 LOC106601112 coding downstream 161294 72303308 ~ 72313156 (+)
LOC110538959 LOC106601112 coding downstream 214413 72356203 ~ 72357759 (+)
G1108025 NA non-coding upstream 33053 72108220 ~ 72108622 (+)
G1108001 NA non-coding upstream 59665 72081793 ~ 72082010 (+)
G1108000 NA non-coding upstream 60329 72081035 ~ 72081346 (+)
G1107994 NA non-coding upstream 68928 72072391 ~ 72072747 (+)
G1107977 NA non-coding upstream 92966 72048506 ~ 72048709 (+)
G1108079 NA non-coding downstream 61889 72203903 ~ 72220119 (+)
G1108093 NA non-coding downstream 80061 72222075 ~ 72223808 (+)
G1108219 NA non-coding downstream 88449 72230463 ~ 72231422 (+)
G1108231 NA non-coding downstream 104198 72246212 ~ 72246725 (+)
G1108243 NA non-coding downstream 116077 72258091 ~ 72258392 (+)
psmg3 psmg3 other upstream 198876 71941515 ~ 71942804 (+)
G1105655 NA other upstream 1235246 70902905 ~ 70906429 (+)
G1105467 LOC106601028 other upstream 1507704 70612303 ~ 70633971 (+)
G1105393 NA other upstream 1770464 70370755 ~ 70371211 (+)
G1109505 NA other downstream 1163411 73305425 ~ 73306154 (+)
LOC110538462 rpc11 other downstream 1242794 73384755 ~ 73386199 (+)
G1109778 NA other downstream 1691629 73833643 ~ 73834606 (+)
G1109786 NA other downstream 1704241 73846255 ~ 73846794 (+)
G1111126 LOC106578813 other downstream 2818252 74960266 ~ 75048356 (+)

Expression


Co-expression Network